Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (DmdB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (352), Expect = 2e-37
 Identities = 131/515 (25%), Positives = 229/515 (44%), Gaps = 38/515 (7%)

Query: 46  GDNQQWRYQAMLERIEQLAAGFTELGLGCGDNVVLQLGNVAEFYLCFFALLRQGIRPILA 105
           GD  +  +  +  R  Q+A     LGL  GD V     N       +F +   G      
Sbjct: 35  GDIHRSTWGQIASRSRQVANALDGLGLPQGDRVATLAWNGYRHLELYFGVSGTGRVLHTL 94

Query: 106 LPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQALAQELLACCPTLQT-VIVRGQTRVTD 164
            P     ++ +   H++ KA   D    P     L + + A CPT++  + +    ++  
Sbjct: 95  NPRLHPEQLVWIVNHAEDKAVCFDMTFLP-----LVKAVAAKCPTVKHWIALCDADKLPA 149

Query: 165 PKFIELASCYSASSCQANA-------DPNQIAFFQLSGGTTGTPKLIPRTHND---YAYS 214
              I     Y A   Q          D N  +    + GTTG PK    +H     +A+ 
Sbjct: 150 DSGIPGLQSYEAWMGQQPTTYAWPTFDENSASSMCYTSGTTGNPKAALYSHRSTLLHAFG 209

Query: 215 VTASVEICRFDQHTRYLCVLPAAHNFPLSSPGALGVFWAGGCVVLSQDAS--PQHAFKLI 272
                 +C   + +    VLP    F +++ G      A GC ++   A+   +  ++LI
Sbjct: 210 AALPDAMCLSARDS----VLPVVPMFHVNAWGLPYAAAAVGCKLVFPGAALDGKSVYELI 265

Query: 273 EQHKITVTALVPPLALLWMDHAEKSTYDLSSLHFVQVGGAKFSEAAARRLPKALGCQLQQ 332
           E  K+T+ A VP +  + + H + +    S+L+   +GG+    A         G ++  
Sbjct: 266 EAEKVTMAAGVPTVWQMLLGHLQANNLKFSTLNRTVIGGSACPPAMISAFNDVYGVEVLH 325

Query: 333 VFGMAE----GLVNYTR-----LDDSAEL-IATTQGRPISAHDQLLVVDEQGQPVASGEE 382
            +GM E    G V   +     L  + +L +   QGR I   D + +V+E G+ +    +
Sbjct: 326 AWGMTEMSPLGTVCTLKNAQLALPPAEQLKVRLKQGRAIFGAD-MKIVNEAGEELPWDGK 384

Query: 383 GY--LLTQGPYTIRGYYRADQHNQRAFNAQG--FYITGDKVKLSSEGYVIVTGRAKDQIN 438
            Y  LL +GP+ I  Y++ +  +   ++AQG  ++ TGD   + ++G++ +T R+KD I 
Sbjct: 385 AYGDLLVRGPWIIASYFKGEGGDPLRYDAQGHGWFPTGDVATIDADGFMQITDRSKDVIK 444

Query: 439 RGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSCAVIVLKPEQSVNTIQLKRFLH 498
            GGE I++ +VEN  + HPAV  AA + +      ER   V+V KP   ++  +L  F +
Sbjct: 445 SGGEWISSIDVENIAMAHPAVAMAACVGMRHPKWDERPIVVVVKKPGTELSREELLAF-Y 503

Query: 499 QAGLADYKIPDQIQFIDQLPKTSVGKIDKNALRRR 533
           +  +A ++IPD + F+D +P  + GK+ K  LR +
Sbjct: 504 EGKIAKWQIPDDVVFVDAIPLGATGKMQKMTLREQ 538