Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., Medium-chain fatty-acid--CoA ligase from Escherichia fergusonii Becca

 Score =  225 bits (574), Expect = 3e-63
 Identities = 170/538 (31%), Positives = 248/538 (46%), Gaps = 28/538 (5%)

Query: 10  EALAAQYRQLGYWQDKTLLDYLQQSAERTPNALALVGDN-QQWRYQAMLERIEQLAAGFT 68
           E   A YRQ G W D +L DY QQ+A   P+ +A+V ++   + Y A+      LA    
Sbjct: 9   EQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGATYTYSALDHAASCLANWML 68

Query: 69  ELGLGCGDNVVLQLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYL- 127
             G+  GD +  QL    EF + + A L+ G   +  LP+ R AE+ +     QAK +  
Sbjct: 69  AKGIESGDRIAFQLPGWCEFTVIYLACLKTGAVSVPLLPSWREAELVWVLNKCQAKMFFA 128

Query: 128 --IDGAQRPFDYQALAQELLACCPTLQTVIVRGQTRVTDPKFIELASCYSASSCQANADP 185
             +    RP D     Q  L   P LQ +       V   K     S  S S   A+  P
Sbjct: 129 PTLFKQTRPVDLILPLQNQL---PQLQQI-------VGVDKLAPATSSLSLSQILADNTP 178

Query: 186 ---------NQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPA 236
                    +++A    + GT G PK +  THN+   S  A            ++   P 
Sbjct: 179 LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPL 238

Query: 237 AHNFPLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAEK 296
            H       G    F  G   VL    +P     L+EQ + T      P     ++  EK
Sbjct: 239 GHATGFLH-GVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNLLEK 297

Query: 297 STYDLSSLHFVQVGGAKFSEAAARRLPKALGCQLQQVFGMAEGLVN-YTRLDDSAELIAT 355
              DLS+L F   GG    +  AR   +  G +L  V+G  E   +    LDD       
Sbjct: 298 QPADLSALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLPRFMH 356

Query: 356 TQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFYIT 415
           T G   +A  ++ VVD+  + +  G EG   ++GP    GY+   +   RA + +G+Y +
Sbjct: 357 TDGYA-AAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYS 415

Query: 416 GDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGER 475
           GD  ++   GY+ +TGR KD I RGGE I++ EVE+ LL HP +HDA ++A+ DE LGER
Sbjct: 416 GDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGER 475

Query: 476 SCAVIVLK-PEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALRR 532
           SCA +VLK P  S++  ++  F  +  +A YK P+ I  I++LP+T  GKI K  LR+
Sbjct: 476 SCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTVSGKIQKFLLRK 533