Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Variovorax sp. SCN45

 Score =  274 bits (701), Expect = 4e-78
 Identities = 171/447 (38%), Positives = 247/447 (55%), Gaps = 34/447 (7%)

Query: 3   SSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCA 62
           +S     ++ V  L   V   L+     V + GEIS FS   SGH Y  LKD   Q++CA
Sbjct: 35  NSAPGPRVWAVGALCHAVADALDARFNPVTVRGEISGFSRASSGHCYFALKDESGQLRCA 94

Query: 63  MFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQL 122
           MF+    L++F P++G QV V+ RL++YEPRGD Q+++ES++  G G L +QF Q K +L
Sbjct: 95  MFRRAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLRRAGQGALFEQFMQRKARL 154

Query: 123 AAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEA 182
            AEGLF   RK+ LP  PR VG++TS   AALHD++  L+RR P++PVV+ P  VQG  A
Sbjct: 155 EAEGLFDPARKRALPTMPRAVGVVTSLGAAALHDVVTALRRRVPHIPVVLAPAAVQGANA 214

Query: 183 AIQIAQAIGRANT-RAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEI 241
             ++ +A+          DV+++ RGGGS+EDLW FN E +ARTI  S +P+IS VGHE 
Sbjct: 215 PGELVRALHSLYALEPAVDVILLVRGGGSIEDLWAFNDEALARTIVQSPVPVISGVGHET 274

Query: 242 DVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQ 301
           D TIADF AD+RAPTP+AAAELVS        AL     +L+ ++               
Sbjct: 275 DFTIADFCADLRAPTPTAAAELVSAPRDLWLGALDLLDERLSDSL--------------- 319

Query: 302 HKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQ 361
                     RL+   Q+LD+ + RL +     L T+QQ   RL+H  +     + +R +
Sbjct: 320 --------GGRLDVLGQRLDQAAGRLGR--PSNLVTRQQL--RLAHHAQRLQ--YAMRSK 365

Query: 362 RFNLIQQEQRI----NQSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGEL 417
           R  L Q  + +       ++R + Q   +L  ++ +   + P   L RGY+      G  
Sbjct: 366 RERLAQAPRAMAADFPSKLERAVTQRHDRLERVALRWRLLDPALVLQRGYAWLTDADGRA 425

Query: 418 VRQSAQVKPGDTLVTQLMDGEILSTVN 444
           V  + Q+ PGD +V +L DGE+  TV+
Sbjct: 426 VVSAKQLAPGDAVVARLADGEVDMTVS 452