Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  289 bits (740), Expect = 1e-82
 Identities = 174/439 (39%), Positives = 243/439 (55%), Gaps = 31/439 (7%)

Query: 6   ANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFK 65
           A R ++ V  L   V   L      V + GE+S FS   SGH Y +LKD   QV+CAMF+
Sbjct: 25  AARRVWAVGPLMRAVADTLSARFNPVAVRGELSGFSRAASGHCYFSLKDDTGQVRCAMFR 84

Query: 66  GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 125
            +   ++F P++GQ V  + +L +Y  RGD Q+I+ES+QP G G L +QF +LK QL AE
Sbjct: 85  RSADQLSFAPRDGQLVEARGKLDVYGARGDLQLIVESLQPAGQGALFEQFLKLKAQLEAE 144

Query: 126 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 185
           GLF + RK+PLP  PR +GI+TS   AAL D++  LKRR P++PV IYP+ VQG +AA +
Sbjct: 145 GLFEEARKRPLPAQPRSIGIVTSLGAAALRDVVTALKRRVPHIPVAIYPSAVQGMQAAAE 204

Query: 186 IAQAIGRANTR----AECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEI 241
           +  A+  A  R     E +VL++ RGGGSLEDLW FN   + RTIA + +P++  VGHE 
Sbjct: 205 LCTALQTAYRRHADTGESEVLLLVRGGGSLEDLWSFNDPALVRTIAQAPMPVVCGVGHET 264

Query: 242 DVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQ 301
           D T+ADFVAD+RAPTP+AAAEL +     +Q  L   Q +L   M   + Q+  +  RL 
Sbjct: 265 DFTLADFVADLRAPTPTAAAELCAPTQVQRQGELSYLQERLNDGMYRDIDQRGQRLDRLT 324

Query: 302 HKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQ 361
            +L +  P  R+   Q+QL  L   L++     L                        Q+
Sbjct: 325 QRLGR--PSGRIHDSQRQLASLQHALQRSGSLAL------------------------QR 358

Query: 362 RFNLIQQEQ-RINQSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQ 420
             N +Q  Q R+ Q++QR L   R +L      L  + P   L RGY+     QG  + +
Sbjct: 359 HHNGLQTLQVRLPQALQRALEMQRQRLQRGQTALGLLDPQLVLQRGYAFLTDEQGMALTR 418

Query: 421 SAQVKPGDTLVTQLMDGEI 439
           +AQ +PG  L   L DG +
Sbjct: 419 AAQARPGQALRATLADGAL 437