Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., ribosome biogenesis GTPase Der from Rhodanobacter sp000427505 FW510-R12

 Score =  461 bits (1186), Expect = e-134
 Identities = 240/494 (48%), Positives = 336/494 (68%), Gaps = 28/494 (5%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           M+PVVALVGRPNVGKSTLFN LTR+RDALVAD PG+TRDR YG  ++GE  F+V+DTGG+
Sbjct: 1   MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRIGERPFVVVDTGGL 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
            G+E+ ++   A+Q   AI EAD ++F+VD R GL   D+AI   LRR  KP + VVNK 
Sbjct: 61  SGTEDAMDVLTAKQVRLAIAEADALVFVVDARDGLLPQDDAILAELRRSGKPIVAVVNKT 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           DG+D  A  AEF+  G+     ++AAH RG    + RVL P              L  + 
Sbjct: 121 DGLDEQAVMAEFFAFGIGATLPLSAAHNRGTDDFL-RVLLPL-------------LPADR 166

Query: 181 DPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT 240
           +P       +E E E       D  I++AI+GRPN GKSTL NR+LGEER++V D+ GTT
Sbjct: 167 EPA------AETEGE-------DGSIRVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTT 213

Query: 241 RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAREN 300
           RD I +P++RD + Y LIDTAG+RR+ R+ E VEKFSV+KTLQ+I  A VV++++DAREN
Sbjct: 214 RDPIRVPLERDGKRYTLIDTAGIRRKARVEEAVEKFSVIKTLQSIAAAQVVVVMIDAREN 273

Query: 301 ISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH 360
           ++DQDL+L+G+A++ GR++VIA+NKWD +    ++  ++ LDRRL FVD+A+   ISALH
Sbjct: 274 LADQDLTLIGYAIDEGRALVIAINKWDDMDPYQRDECRRALDRRLVFVDWAKQVQISALH 333

Query: 361 GTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP 420
           G+G+  L  +V  A+ SAT  + +S LT+ ++ A + +QPP+V G   KL++AH GG NP
Sbjct: 334 GSGLRELMRAVVRAHASATRELVSSDLTKALEKAYESYQPPLVNGHAPKLRFAHPGGTNP 393

Query: 421 PIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQE- 479
           P IVIHG++   +  +Y+RYL N++RK  ++ GTPIRI F+  ENP+ G+   +T  Q+ 
Sbjct: 394 PTIVIHGSRTKHIAPAYQRYLENFFRKRYKLEGTPIRIVFREGENPYAGRKKVLTKEQQH 453

Query: 480 RQRKRLMSMVKNRR 493
           + R+R   ++K  R
Sbjct: 454 KARRRRSELIKRTR 467