Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., GTPase Era from Xanthobacter sp. DMC5

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 4/151 (2%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
           VAL+G PN GKSTL N L  T+ ++V+     TR    G A  G  + +++DT GI   +
Sbjct: 93  VALLGAPNAGKSTLTNALVGTKVSIVSHKVQTTRSIVRGIALDGAAQVVLVDTPGIFAPK 152

Query: 65  EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGID 124
             +E  M   +     +ADV+  +VD   GL    EA+   L+ I KP  L++NK+D I 
Sbjct: 153 RRLERAMVSSAWTHAADADVIALLVDANRGLDEDIEALLGQLKDIRKPRALILNKIDLIR 212

Query: 125 ADA----ASAEFWQLGMDQMYQIAAAHGRGV 151
            D+    A+A   ++  D+++ ++A  G GV
Sbjct: 213 RDSLLALAAAITERVPFDRVFMVSALTGDGV 243



 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 14/208 (6%)

Query: 164 EQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIK-------LAIIGRPNV 216
           +++ ++    +DL  ++ PE+++ +  ++E + E +R    P++       +A++G PN 
Sbjct: 43  DELLNDDLPEDDLPEDDLPEDDEDDDFDDELDRE-ERGPLAPLEGPTRCGFVALLGAPNA 101

Query: 217 GKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKF 276
           GKSTLTN ++G +  +V     TTR  +         + VL+DT G+   KR    +E+ 
Sbjct: 102 GKSTLTNALVGTKVSIVSHKVQTTRSIVRGIALDGAAQVVLVDTPGIFAPKR---RLERA 158

Query: 277 SVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEH 336
            V        DA+V+ L+VDA   + +   +LLG   +  +   + +NK D +  D    
Sbjct: 159 MVSSAWTHAADADVIALLVDANRGLDEDIEALLGQLKDIRKPRALILNKIDLIRRDSLLA 218

Query: 337 VKKELDRRLGFVDFARIHFISALHGTGV 364
           +   +  R   V F R+  +SAL G GV
Sbjct: 219 LAAAITER---VPFDRVFMVSALTGDGV 243