Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., GTP-binding protein EngA from Variovorax sp. SCN45

 Score =  462 bits (1190), Expect = e-135
 Identities = 235/471 (49%), Positives = 328/471 (69%), Gaps = 27/471 (5%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           M PVVALVGRPNVGKSTLFNRLT+TRDA+VADF GLTRDR YG  +LG+HEFIVIDTGG 
Sbjct: 1   MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF 60

Query: 61  D-GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
           +  +  G+  +MA+Q+  A+ EADVV+F+VD R GL+  D  IA  LRR+ KP +L  NK
Sbjct: 61  EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120

Query: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNE 179
            +G+       +F++LG   ++ ++AAHG+G+  L++  L P                N 
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALEPL---------------NL 165

Query: 180 EDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGT 239
            DP++E      EE EA      + PIKLA+ GRPNVGKSTL N  LGEER+V +DMPGT
Sbjct: 166 PDPDDES-----EEDEA------NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGT 214

Query: 240 TRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARE 299
           TRD+I +P +R+ + + LIDTAG+RR+ R+ E +EKFSVVKTLQAIE ANVVLL++DA +
Sbjct: 215 TRDAISVPFERNGQRFELIDTAGLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQ 274

Query: 300 NISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISAL 359
            ++DQD  + G+ L SGR++VIA+NKWD +    +E ++++++ RL F+ FA +HFISA+
Sbjct: 275 GVTDQDAHIAGYILESGRAVVIAINKWDAVDSYQREQIQRQIETRLPFLKFAALHFISAI 334

Query: 360 HGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYN 419
              G+G +++++ +A++SAT ++ T VLTR++  A     P      R KL+YAH GG N
Sbjct: 335 KRQGLGPVWQAIAQAHKSATRKMSTPVLTRLLLEAVQFQAPKRGGMYRPKLRYAHQGGMN 394

Query: 420 PPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGK 470
           PP+IVIHGN +  + D+YKR+L   +RK  +++GTP+RI+F++S NPF  K
Sbjct: 395 PPVIVIHGNSLEHVTDAYKRFLEGRFRKEFDLVGTPLRIEFKSSHNPFADK 445