Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., GTP-binding protein EngA from Sphingobium sp. HT1-2

 Score =  318 bits (816), Expect = 2e-91
 Identities = 187/475 (39%), Positives = 276/475 (58%), Gaps = 31/475 (6%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           M+P VA+VGRPNVGKSTLFNRL   + ALV D PG+TRDR+ G+A L   +F +IDT G 
Sbjct: 1   MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRREGEAHLLGLDFTIIDTAGY 60

Query: 61  DGSE-EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
           +  +   +  +M  Q+ AA++  DV LFMVD RAG+T  DE IA+ LR  + P ILV NK
Sbjct: 61  EDEDPHSLPGRMRMQTQAAVENCDVALFMVDARAGITPLDEEIARWLREGDAPVILVANK 120

Query: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNE 179
            +G   +A   E + LG+ +    +A HG+G+  L   +L P+ E+              
Sbjct: 121 AEGKATEAGVMEAFILGLGEPIPFSAEHGQGLADLFQALL-PYLER-------------- 165

Query: 180 EDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGT 239
           ED EE + E+ E+E  A        P+KLAI+GRPN GKSTL NR+LGE R++     G 
Sbjct: 166 EDGEEHEKEFYEDEESA--------PLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAGI 217

Query: 240 TRDSIYIPM-----KRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLV 294
           TRDSI +       + +ER   LIDTAG+R+R ++ + +EK +V   L A+  A VV+L+
Sbjct: 218 TRDSIAVDWMWTSYEGEERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVLL 277

Query: 295 VDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFD--VKEHVKKELDRRLGFVDFAR 352
           +DA   +  QDL +    L  GR++++A+NKWD +     + + +K+ L   L  V    
Sbjct: 278 LDATRGLEAQDLRIADKVLEEGRALIVALNKWDTVEHGSALYQGIKQALFDGLAQVRGVP 337

Query: 353 IHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKY 412
           I  +SA  G G+  L +   E   + + R+ T VL R  + A + + PP   G+R+KL+Y
Sbjct: 338 IMTVSAATGKGLDDLIKVAFETRTAWSQRISTGVLNRWFEAALEANPPPAPGGKRIKLRY 397

Query: 413 AHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPF 467
                  PP  V+ G +++ELP+SY+RYL+N  RK L     P+R+  ++++NP+
Sbjct: 398 ITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRSAKNPY 452