Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score =  574 bits (1480), Expect = e-168
 Identities = 298/497 (59%), Positives = 367/497 (73%), Gaps = 19/497 (3%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           MVPV+ALVGRPNVGKST+FNRLT+TRDA+V D  GLTRDR+YG A      FI+IDTGGI
Sbjct: 1   MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
            G E G++ KMA+QSL AI+EAD VLF+VD RAG+T AD+ IA+HLR+  K AILV NK+
Sbjct: 61  TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANKI 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           D ID D A AEF  +GM     +A + GRG+ AL++ VL                     
Sbjct: 121 DNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLGHLPR---------------- 164

Query: 181 DPEEEQLEYSEEEAEAEYK---RLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 237
           D EEE LE    E E   +     +   IK+AIIGRPNVGKSTL NR+LGEERVVVYD P
Sbjct: 165 DAEEEALEQDVAEGEEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEP 224

Query: 238 GTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDA 297
           GTTRDSIYIP +RD  +Y  IDTAGVR+R +I+E VEKFSVVKTLQAI+DANVV+ V+DA
Sbjct: 225 GTTRDSIYIPFERDGEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDA 284

Query: 298 RENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFIS 357
           RE + D DL+LLGFAL +GR+IVIA+NKWDG+    + +VK EL+RRL FVDFA IHFIS
Sbjct: 285 REGVVDHDLNLLGFALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFIS 344

Query: 358 ALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGG 417
           ALHGTGVG+L++SVQ A++SA TR  TS LT+I++ A  +HQPPMV GRR+KL+YAH GG
Sbjct: 345 ALHGTGVGNLYKSVQAAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGG 404

Query: 418 YNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLS 477
            NPP+IVIHGNQ + +P SY RYL N YR+ L+++GTPIRI+++  ENP+EGK N +T  
Sbjct: 405 ANPPLIVIHGNQTDSIPKSYSRYLENTYRRVLKLVGTPIRIEYKGGENPYEGKKNTLTDR 464

Query: 478 QERQRKRLMSMVKNRRK 494
           Q  +++RLMS  K   K
Sbjct: 465 QVNKKRRLMSHHKKAEK 481