Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., GTPase Der from Pseudomonas sp. DMC3

 Score =  572 bits (1474), Expect = e-167
 Identities = 294/501 (58%), Positives = 371/501 (74%), Gaps = 24/501 (4%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           MVPV+ALVGRPNVGKSTLFNRLTRTRDA+V D  GLTRDR+YG+AK     +I+IDTGGI
Sbjct: 1   MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
            G E G++ KMA+QSL AI+EADVVLF+VD +AG T AD+ IA+HLR+  K + +V NKV
Sbjct: 61  SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANKV 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           D ID + A AEF  LGM     IA AHGRG+  L++  L+ F                  
Sbjct: 121 DNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALSEFPRD--------------- 165

Query: 181 DPEEEQLEYSEEEAEAEYKRLQDLP-------IKLAIIGRPNVGKSTLTNRILGEERVVV 233
             ++E  E  EEE  AE +  + +P       IK+AIIGRPNVGKSTL NR+LGE+RV+V
Sbjct: 166 --DDEPAEGEEEEVVAEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIV 223

Query: 234 YDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLL 293
           YD PGTTRDSIYIP +R+E +Y LIDTAGVR+R +I+E VEKFSVVKTLQAI+DANVV+ 
Sbjct: 224 YDQPGTTRDSIYIPFERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIF 283

Query: 294 VVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARI 353
           V+DARE + D DL+LLGFA+ SGR++VIA+NKWDG++   ++ VK EL RRL FVD+A I
Sbjct: 284 VMDAREGVVDHDLNLLGFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADI 343

Query: 354 HFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYA 413
           HFISALHGTGVG+L+ SVQ +++SA TR  T+ LT+I++ A  +H PPMV  RR+KL+YA
Sbjct: 344 HFISALHGTGVGNLYASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYA 403

Query: 414 HAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNK 473
           H GG NPPIIVIHGNQ+ ++P SY RYL N YR+ L+++GTPIRI+F+  ENP+EG  N 
Sbjct: 404 HLGGANPPIIVIHGNQIEKVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNT 463

Query: 474 MTLSQERQRKRLMSMVKNRRK 494
           +T  Q  +++RLMS  K   K
Sbjct: 464 LTDRQVNKKRRLMSHNKKASK 484