Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., ribosome biogenesis GTPase Der from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  283 bits (723), Expect = 1e-80
 Identities = 167/462 (36%), Positives = 259/462 (56%), Gaps = 35/462 (7%)

Query: 4   VVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG-IDG 62
           ++A+VGRPNVGKSTLFNRL   R A++ +  G+TRDR YG        + VIDTGG + G
Sbjct: 5   IIAIVGRPNVGKSTLFNRLIGQRKAIMDNVSGVTRDRSYGHGDWTGKYYTVIDTGGYVHG 64

Query: 63  SEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDG 122
           SE+  E+++ +Q   A++EADV+LFMVD  AGLT  DE  A  LRR +KP  +V NK D 
Sbjct: 65  SEDIFESEINRQVELAMNEADVILFMVDVDAGLTGLDEEFANVLRRTDKPVYVVANKADT 124

Query: 123 IDADAASAEFWQLGMD-QMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEED 181
                   EF+ LG+   +Y I++  G G G L+D V+  F ++              ED
Sbjct: 125 NARMHQMGEFYALGVGIDIYPISSQSGSGTGELLDEVVKHFKDE------------GVED 172

Query: 182 PEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTR 241
           P+                    +P K+A++GRPNVGKS+  N +LGEER +V D  GTTR
Sbjct: 173 PDA------------------GIP-KIAVLGRPNVGKSSFVNLLLGEERNIVTDRAGTTR 213

Query: 242 DSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENI 301
           D+I+       +E++++DTAG+RR+ +++E +E +SV+++++A+EDA+V ++++DA   I
Sbjct: 214 DAIHARYNAFGKEFIIVDTAGLRRKSKVSEDIEFYSVLRSVRALEDADVCIVILDATRGI 273

Query: 302 SDQDLSLLGFALNSGRSIVIAVNKWDGLSFD--VKEHVKKELDRRLGFVDFARIHFISAL 359
             QD++++  A  + + IVI VNKWD +  D    +  + E+  R+  + +  I F S +
Sbjct: 274 EAQDVNIIALAEKNRKGIVILVNKWDLVEKDTHTTKQFEDEIYNRIAPISYVPIIFTSVV 333

Query: 360 HGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYN 419
               +    E   E Y + T ++ TS L   M    + + PP ++G+ VK+KY      +
Sbjct: 334 TKQRIHKAIEVAMEVYDNKTKKIPTSKLNDAMLPEIERYPPPAIKGKFVKIKYITQLPTH 393

Query: 420 PPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQ 461
            P      N    + +SY RYL N  R+     G PI++ F+
Sbjct: 394 NPTFAFFCNLPQYVKESYVRYLENRMREHFGFTGVPIKLVFR 435



 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 6/143 (4%)

Query: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI- 60
           +P +A++GRPNVGKS+  N L      +V D  G TRD  + +      EFI++DT G+ 
Sbjct: 177 IPKIAVLGRPNVGKSSFVNLLLGEERNIVTDRAGTTRDAIHARYNAFGKEFIIVDTAGLR 236

Query: 61  --DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVN 118
                 E +E     +S+ A+++ADV + ++D   G+   D  I     +  K  +++VN
Sbjct: 237 RKSKVSEDIEFYSVLRSVRALEDADVCIVILDATRGIEAQDVNIIALAEKNRKGIVILVN 296

Query: 119 KVDGIDADAASAEFWQLGMDQMY 141
           K D ++ D  + + ++   D++Y
Sbjct: 297 KWDLVEKDTHTTKQFE---DEIY 316