Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., tRNA modification GTPase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 206 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRR 265
           +   I+G PN GKSTL N++L EE+ +V D+PGTTRD I   +  +   +  IDTAG+R 
Sbjct: 223 VPTVIVGNPNAGKSTLLNKLLNEEKAIVSDVPGTTRDFIEDEINIEGITFRFIDTAGLR- 281

Query: 266 RKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNK 325
                + VE   V +T+Q +  +++++ + D  E  + Q  + L         +V   NK
Sbjct: 282 --ETTDKVEAIGVERTMQKLSQSSLIIYLFDITEVTAAQVQAELDRLNPKKLPLVAVANK 339

Query: 326 WDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQE 373
            D          +   D+   F     +  ISA  G  +  L +++ E
Sbjct: 340 ID----------RAPADKVAAFESIEGLVTISAAEGANLDELKQALVE 377



 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 8/161 (4%)

Query: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGID 61
           VP V +VG PN GKSTL N+L     A+V+D PG TRD    +  +    F  IDT G+ 
Sbjct: 223 VPTV-IVGNPNAGKSTLLNKLLNEEKAIVSDVPGTTRDFIEDEINIEGITFRFIDTAGLR 281

Query: 62  GSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVD 121
            + + VE    ++++  + ++ +++++ D         +A    L   + P + V NK+D
Sbjct: 282 ETTDKVEAIGVERTMQKLSQSSLIIYLFDITEVTAAQVQAELDRLNPKKLPLVAVANKID 341

Query: 122 GIDADAASAEFWQLGMDQMYQIAAAHGRGVG----ALIDRV 158
              AD  +A      ++ +  I+AA G  +     AL+++V
Sbjct: 342 RAPADKVAA---FESIEGLVTISAAEGANLDELKQALVEKV 379