Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., GTPase Era from Pantoea agglomerans CFBP13505 P0401

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 7/156 (4%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
           VA+VGRPNVGKSTL N+L   + ++ +  P  TR R  G    GE++ I +DT G+   E
Sbjct: 11  VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGEYQAIYVDTPGLHMEE 70

Query: 65  E-GVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGI 123
           +  +   M + + ++I + ++V+F+V+G    T  DE +   LR  + P +L +NKVD I
Sbjct: 71  KRAINRLMNRAASSSIGDVELVIFVVEG-TRWTPDDEMVLGKLRDNKVPVVLAINKVDNI 129

Query: 124 DADAASAEFWQLGMDQM-----YQIAAAHGRGVGAL 154
              +      Q    QM       I+A  G+ V  +
Sbjct: 130 QDKSILLPHLQFLSQQMNFLDIVPISAESGKNVDTI 165



 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 31/280 (11%)

Query: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267
           +AI+GRPNVGKSTL N++LG++  +    P TTR  I       E + + +DT G+   +
Sbjct: 11  VAIVGRPNVGKSTLLNQLLGQKVSITSRKPQTTRHRIMGIHTEGEYQAIYVDTPGLHMEE 70

Query: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWD 327
           +    + +        +I D  +V+ VV+      D ++ +LG   ++   +V+A+NK D
Sbjct: 71  K--RAINRLMNRAASSSIGDVELVIFVVEGTRWTPDDEM-VLGKLRDNKVPVVLAINKVD 127

Query: 328 GLSFD--VKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTS 385
            +     +  H+ + L +++ F+D      ISA  G  V  +    ++    A       
Sbjct: 128 NIQDKSILLPHL-QFLSQQMNFLDIVP---ISAESGKNVDTIAAITRKHLPQADHHFPED 183

Query: 386 VLTRIMK--MATDDHQPPMVRGRRVKLKYA-----------HAGGYNPPIIVIHGNQVNE 432
            +T   +  MA++  +  ++R    +L Y+             GGY+     IHG  + E
Sbjct: 184 YITDRSQRFMASEMIREKLMRFLGAELPYSVTVEIERFVTNERGGYD-----IHGLILVE 238

Query: 433 LPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTN 472
                K  + N   K ++++GT  R   ++ E  FE K +
Sbjct: 239 REGQKKMVIGNKGAK-IKVIGTEAR---RDMEEMFEAKVH 274