Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., GTPase ObgE from Magnetospirillum magneticum AMB-1

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 13/181 (7%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGG- 59
           M+    LVG PN GKST    +TR R   +AD+P  T     G   LGE EF++ D  G 
Sbjct: 158 MIADAGLVGLPNAGKSTFLAAVTRARPK-IADYPFTTLHPNLGVVTLGEEEFVIADIPGL 216

Query: 60  IDGSEEGVETKMAQQSLAAIDEADVVLFMVDG------RAGLTVADEAIAQHLRRIEKPA 113
           I+G+ EG    +  + L  I+   V+L ++DG       A   V  E  A      EKP 
Sbjct: 217 IEGAHEG--AGIGDRFLGHIERCRVLLHLIDGTQDDVAEAYRVVRHELAAYGGGLDEKPE 274

Query: 114 ILVVNKVDGIDADAASAEFWQLGM---DQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQ 170
           ++ +NK D + AD    +  +L      ++  ++   G G+  ++ R+     E  E+E 
Sbjct: 275 VVALNKCDSLTADDIELKLMELSEACGQEVLPLSGVSGVGLKPILARLFTHIREAREAEP 334

Query: 171 A 171
           A
Sbjct: 335 A 335



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 45/199 (22%), Positives = 72/199 (36%), Gaps = 67/199 (33%)

Query: 210 IIGRPNVGKSTLTNRI-----------------------LGEERVVVYDMPGTTRDSIYI 246
           ++G PN GKST    +                       LGEE  V+ D+PG    +   
Sbjct: 164 LVGLPNAGKSTFLAAVTRARPKIADYPFTTLHPNLGVVTLGEEEFVIADIPGLIEGA--- 220

Query: 247 PMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAREN------ 300
                       + AG+  R               L  IE   V+L ++D  ++      
Sbjct: 221 -----------HEGAGIGDR--------------FLGHIERCRVLLHLIDGTQDDVAEAY 255

Query: 301 -ISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISAL 359
            +   +L+  G  L+  +  V+A+NK D L+ D  E    EL    G      +  +S +
Sbjct: 256 RVVRHELAAYGGGLDE-KPEVVALNKCDSLTADDIELKLMELSEACG----QEVLPLSGV 310

Query: 360 HGTG----VGHLFESVQEA 374
            G G    +  LF  ++EA
Sbjct: 311 SGVGLKPILARLFTHIREA 329