Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., GTP-binding protein Era from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
           +A+VGRPNVGKSTL N+L   + ++ +     TR R  G    G ++ I +DT G+   E
Sbjct: 11  IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGPYQAIYVDTPGLHMEE 70

Query: 65  E-GVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGI 123
           +  +   M + + ++I + ++V+F+V+G    T  DE +   LR  + P IL VNKVD +
Sbjct: 71  KRAINRLMNKAASSSIGDVELVIFVVEG-TRWTPDDEMVLNKLRDGKAPVILAVNKVDNV 129



 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)

Query: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAG--VRR 265
           +AI+GRPNVGKSTL N++LG++  +      TTR  I         + + +DT G  +  
Sbjct: 11  IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGPYQAIYVDTPGLHMEE 70

Query: 266 RKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRS-IVIAVN 324
           ++ IN  + K        +I D  +V+ VV+      D ++ L    L  G++ +++AVN
Sbjct: 71  KRAINRLMNK----AASSSIGDVELVIFVVEGTRWTPDDEMVL--NKLRDGKAPVILAVN 124

Query: 325 KWDGL--SFDVKEHVKKELDRRLGFVDFARI 353
           K D +    D+  H+ + L  ++ F+D   I
Sbjct: 125 KVDNVQEKVDLLPHL-QFLASQMNFLDIVPI 154