Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., putative GTP-binding factor (VIMSS) from Escherichia coli BW25113

 Score =  705 bits (1819), Expect = 0.0
 Identities = 358/493 (72%), Positives = 416/493 (84%), Gaps = 3/493 (0%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYG+A++   EFI IDTGGI
Sbjct: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
           DG+E+GVET+MA+QSL AI+EADVVLFMVD RAGL  ADEAIA+HLR  EKP  LV NK 
Sbjct: 61  DGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKT 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           DG+D D A  +F+ LG+ ++Y IAA+HGRGV +L++ VL P+ E +  ++   ED     
Sbjct: 121 DGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWA 180

Query: 181 DPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT 240
             E E  E  EEE E ++   Q LPIKLAI+GRPNVGKSTLTNRILGEERVVVYDMPGTT
Sbjct: 181 QFEAE--ENGEEEEEDDFDP-QSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTT 237

Query: 241 RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAREN 300
           RDSIYIPM+RD REYVLIDTAGVR+R +I + VEKFSV+KTLQAIEDANVV+LV+DARE 
Sbjct: 238 RDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREG 297

Query: 301 ISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH 360
           ISDQDLSLLGF LNSGRS+VI VNKWDGLS +VKE VK+ LD RLGF+DFAR+HFISALH
Sbjct: 298 ISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALH 357

Query: 361 GTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP 420
           G+GVG+LFESV+EAY S+T RVGTS+LTRIM MA +DHQPP+VRGRRVKLKYAHAGGYNP
Sbjct: 358 GSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNP 417

Query: 421 PIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER 480
           PI+VIHGNQV +LPDSYKRYLMNY+RKSL++MG+PIRIQF+  ENP+  K N +T +Q R
Sbjct: 418 PIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMR 477

Query: 481 QRKRLMSMVKNRR 493
           +RKRLM  +K  +
Sbjct: 478 KRKRLMKHIKKNK 490