Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., GTP-binding protein Era from Alteromonas macleodii MIT1002

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 7/161 (4%)

Query: 4   VVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGS 63
           +VA+VGRPNVGKSTL NRL   + ++ +  P  TR R  G    G+++ I +DT G+   
Sbjct: 21  LVAIVGRPNVGKSTLLNRLLGQKVSITSRKPQTTRHRILGIDTDGDYQAIYVDTPGLHQD 80

Query: 64  EE-GVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDG 122
           E+  +   M + + +++ E  +VLF+V+G       DE +   +++   P  L+VNK+D 
Sbjct: 81  EKRAINRYMNRAASSSLAEVGLVLFVVEGDR-FNAEDEMVLSKVKQANLPCYLIVNKMDK 139

Query: 123 I-DADAASAEFWQLG----MDQMYQIAAAHGRGVGALIDRV 158
           + D +       +LG     + M  I+A  GR V  + + V
Sbjct: 140 VEDKENFMVHLKKLGEKHPFEHMIPISAKQGRMVDEIRELV 180



 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 29/277 (10%)

Query: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267
           +AI+GRPNVGKSTL NR+LG++  +    P TTR  I       + + + +DT G+ + +
Sbjct: 22  VAIVGRPNVGKSTLLNRLLGQKVSITSRKPQTTRHRILGIDTDGDYQAIYVDTPGLHQDE 81

Query: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWD 327
           +    + ++       ++ +  +VL VV+  +  + +D  +L     +     + VNK D
Sbjct: 82  K--RAINRYMNRAASSSLAEVGLVLFVVEG-DRFNAEDEMVLSKVKQANLPCYLIVNKMD 138

Query: 328 GLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAY------------ 375
               + KE+    L +      F  +  ISA  G  V  + E V ++             
Sbjct: 139 --KVEDKENFMVHLKKLGEKHPFEHMIPISAKQGRMVDEIRELVAKSLPKSEFFFPEDYI 196

Query: 376 --RSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNEL 433
             RS+       +  ++M+  T D  P        + K A  G Y    +++        
Sbjct: 197 TDRSSRFMAAEIIREKLMRF-TGDELPYSTTVEIEQFKMADNGVYRISGLILVER----- 250

Query: 434 PDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGK 470
            ++ KR ++    K L+ +G   R   ++ EN F+ K
Sbjct: 251 -ETQKRMIIGKGGKHLKTIGEQAR---KDMENLFDNK 283