Pairwise Alignments
Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056
Subject, 595 a.a., quinoprotein ethanol dehydrogenase from Pseudomonas putida KT2440
Score = 50.8 bits (120), Expect = 1e-10
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 45/210 (21%)
Query: 83 DPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFIGSENGVVNALDAETGEPLWASAIEGE 142
DP+N + I T L ++G S ++N + + P+WA + GE
Sbjct: 37 DPKNPQQIVTNGLGVQGQRY---------------SPLDLLNVNNVKELRPVWAFSFGGE 81
Query: 143 VL----AAPAADNNIVIVNTSRGALIALNQEDGAQKWTISTEVPNLTLRGDSRP------ 192
A P + ++ + S + A++ G + W +P+ D RP
Sbjct: 82 KQRGQQAQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPD-----DIRPCCDVIN 136
Query: 193 --TAVAGG-VFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGT 249
A+ G VF+GT +L A + G+++W + V K + A+P+++ G
Sbjct: 137 RGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEG------YSISAAPMIVNGK 190
Query: 250 LFT------VGFNGQLIAIDLRSGQPIWKR 273
L T G G++ A + +G+ +W R
Sbjct: 191 LITGVAGGEFGVVGKIQAYNPENGELLWMR 220
Score = 45.1 bits (105), Expect = 5e-09
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 77 GVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKL-FIGSENGVVNALDAETGEPLW 135
GV++A+DP +GK +W + A L GG+ G L F G+ G + A +A+TG+ +W
Sbjct: 470 GVLRAIDPVSGKEVWRH----KNYAPLWGGVLTTKGNLVFTGTPEGFLQAFNAKTGDKVW 525
Query: 136 ASAIEGEVLAAP 147
VL +P
Sbjct: 526 EFQTGSGVLGSP 537
Score = 43.1 bits (100), Expect = 2e-08
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 241 ASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDM-----------ATDGSRLY 289
A PL+ G ++ G ++ A+D R+G+ +W+ + D+ A G+ ++
Sbjct: 88 AQPLIKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGNLVF 147
Query: 290 LVTDKDHLVAVDTRSGTELWSNTQLEHR----LLTAPKMIDDYLVVGDAEG 336
T LVA++ +G +WS +H+ + AP +++ L+ G A G
Sbjct: 148 FGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGG 198
Score = 40.0 bits (92), Expect = 2e-07
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 112 GKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAAD---------NNIVIVNTSRGA 162
G +++ V A+DA TG+ LW P D N+V T
Sbjct: 95 GVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGNLVFFGTLDAK 154
Query: 163 LIALNQEDGAQKWT---------ISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIA 213
L+ALN++ G W+ S + + G T VAGG F G++ A
Sbjct: 155 LVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNG-KLITGVAGGEFGVV--GKIQAYNP 211
Query: 214 ERGQLIWQQP 223
E G+L+W +P
Sbjct: 212 ENGELLWMRP 221
Score = 35.4 bits (80), Expect = 4e-06
Identities = 59/240 (24%), Positives = 86/240 (35%), Gaps = 49/240 (20%)
Query: 73 ASRDGVVKALDPQNGKVI----------WTTDLEIEG-----SARLSG-------GITAA 110
A R+G LD NGK I W T L+ +G A G G +
Sbjct: 348 ADRNGFFYVLDRTNGKFIRGFPFVDKITWATGLDKDGRPIYNDASRPGAPGSEAKGSSVF 407
Query: 111 FGKLFIGSENGVVNALDAETG-----EPLWASAIEGEVLAAP------AADNNIVIVNTS 159
F+G++N + A + +TG W I E +A A I +N
Sbjct: 408 VAPAFLGAKNWMPMAYNKDTGLFYVPSNEWGMDIWNEGIAYKKGAAFLGAGFTIKPLNED 467
Query: 160 R-GALIALNQEDGAQKWTISTEVPN----LTLRGDSRPTAVAGGVFWGTPSGRLAAAIAE 214
G L A++ G + W P LT +G+ VF GTP G L A A+
Sbjct: 468 YIGVLRAIDPVSGKEVWRHKNYAPLWGGVLTTKGNL--------VFTGTPEGFLQAFNAK 519
Query: 215 RGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGTLFTVGFNGQLIA---IDLRSGQPIW 271
G +W+ G + + +D + V+ G V G +A D G +W
Sbjct: 520 TGDKVWEFQTGSGVLGSPVTWEMDGEQYVSVVSGWGGAVPLWGGEVAKRVKDFNQGGMLW 579
Score = 32.0 bits (71), Expect = 5e-05
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 70 VFVASRDGVVKALDPQNGKVIWTTDL-EIEGSARLSGGITAAFGKLF---IGSENGVVNA 125
VF + D + AL+ GKV+W+ + + + +S GKL G E GVV
Sbjct: 146 VFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGGEFGVVGK 205
Query: 126 LDA---ETGEPLW-ASAIEGEV 143
+ A E GE LW +EG +
Sbjct: 206 IQAYNPENGELLWMRPTVEGHM 227
Score = 32.0 bits (71), Expect = 5e-05
Identities = 41/163 (25%), Positives = 61/163 (37%), Gaps = 40/163 (24%)
Query: 41 TPKTLWSASVGDGVGHYFSKLAPDYAYDKVF--VASRD----GVVKALDPQNGKVIWTTD 94
T K +WS V D Y AP K+ VA + G ++A +P+NG+++W
Sbjct: 162 TGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGGEFGVVGKIQAYNPENGELLWMRP 221
Query: 95 LEIEGSARLSGGITAAFGKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAP------A 148
+EG G GK ENG+ +T W + AAP
Sbjct: 222 T-VEGHM----GYVYKDGKAI---ENGISGGEAGKT----WPGDLWKTGGAAPWLGGYYD 269
Query: 149 ADNNIVIVNTSRGA----------------LIALNQEDGAQKW 175
+ N+++ T A +ALN +DG KW
Sbjct: 270 PETNLILFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKW 312
Score = 26.6 bits (57), Expect = 0.002
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 268 QPIW-------KRNYSSATDMATDGSRLYLVTDKDHLVAVDTRSGTELW 309
+P+W K+ A + DG +YL + AVD R+G +LW
Sbjct: 71 RPVWAFSFGGEKQRGQQAQPLIKDGV-MYLTGSYSRVFAVDARTGKKLW 118