Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dianthicola ME23

 Score =  332 bits (850), Expect = 1e-95
 Identities = 166/391 (42%), Positives = 242/391 (61%), Gaps = 10/391 (2%)

Query: 3   KLFNQVLVAAGVLALLAGCA---SEEENVIMAPLPIVKSEFTPKTLWSASVGDGVGHYFS 59
           +L   +LV    + LL+GC+    EE+ V M+PLP V ++FTP  +WS SVGDG+G ++S
Sbjct: 2   QLRKTLLVGLVSVTLLSGCSLFDREEDVVKMSPLPQVTNQFTPTKVWSRSVGDGIGEFYS 61

Query: 60  KLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGS-------ARLSGGITAAFG 112
            L P +   +V+ A R G VKALD  +G+  W  DL  +         A LSGG+  +  
Sbjct: 62  NLHPIWQDSRVYAADRHGTVKALDLNSGEEKWRADLAEKTGLLSSNRPALLSGGVAVSGN 121

Query: 113 KLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGA 172
            +++GSE   + AL+A+ G   W + + GEVL++P   + +VI++TS G L AL++ DG 
Sbjct: 122 HVYVGSERAQLFALNADDGTLQWQTKVAGEVLSSPVVSDGMVIIHTSNGMLQALSESDGT 181

Query: 173 QKWTISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATE 232
            KWT++ ++P+L+LRG+S PTA  G    G  +GR++A +  +GQLIWQQ + QP GATE
Sbjct: 182 IKWTVNLDMPSLSLRGESAPTAAFGAAIVGGDNGRVSAVMINQGQLIWQQRISQPGGATE 241

Query: 233 IDRLVDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVT 292
           I RL DVD +P+V    ++ +G+NG L A+DLRSGQ  WKR   S  D   DG R+YLV 
Sbjct: 242 IARLNDVDTTPVVASNVVYALGYNGNLTALDLRSGQITWKREIGSVNDFIVDGDRIYLVD 301

Query: 293 DKDHLVAVDTRSGTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQ 352
             D + A++T  G  +W    L HR LTAP + + YLVVGDAEGYLHW++   G F+ QQ
Sbjct: 302 QDDRITALNTNGGVVIWRQGDLLHRNLTAPALYNGYLVVGDAEGYLHWVNTTDGRFVVQQ 361

Query: 353 LVNDSGFAVGPLALNDGYVIVTRNGQIKKLT 383
            V+ SG    P+  +D  ++  ++G++   T
Sbjct: 362 KVDGSGLLSKPVVASDKLLVQAKDGEVYAFT 392