Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., FOG: WD40-like repeat from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 77.8 bits (190), Expect = 8e-19
 Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)

Query: 110 AFGKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQE 169
           A GK+  G+  G V AL  ETG   W+      + ++P   +++VI  T  G + ALN  
Sbjct: 299 AKGKVIFGNSVGKVEALSIETGRLEWSYDTGAGIFSSPVRYHDLVIFGTGDGNIYALNLT 358

Query: 170 DGAQKWTISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKG 229
           DG  +W        L       P    G V+ G   G+  A  A+ G+++W    G  +G
Sbjct: 359 DGELEWKTPASAAVL-----GSPIVEDGKVYIGASDGKFRALDAKDGKVLW--VFGGLEG 411

Query: 230 ATEIDRLVDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDG---- 285
                    V + PL+  G +    ++  L A+D  SG+  WK +  SA  M +      
Sbjct: 412 --------PVVSKPLIYQGKVIFGAWDRHLYAVDRASGKLAWKWDNGSANRMYSPAMCVP 463

Query: 286 ----SRLYLVTDKDHLVAVDTRSGTELWSNTQ 313
                 +Y+V    ++ A+D  SG ELW + +
Sbjct: 464 VAHEGVVYIVAPDRYITALDAASGEELWRSNE 495



 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 30/312 (9%)

Query: 41  TPKTLWSASVGDGVGHYFSKLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGS 100
           T +  WS   G G+   FS  +P   +D V   + DG + AL+  +G++ W T      S
Sbjct: 319 TGRLEWSYDTGAGI---FS--SPVRYHDLVIFGTGDGNIYALNLTDGELEWKTP----AS 369

Query: 101 ARLSGGITAAFGKLFIGSENGVVNALDAETGEPLWA-SAIEGEVLAAPAADNNIVIVNTS 159
           A + G      GK++IG+ +G   ALDA+ G+ LW    +EG V++ P      VI    
Sbjct: 370 AAVLGSPIVEDGKVYIGASDGKFRALDAKDGKVLWVFGGLEGPVVSKPLIYQGKVIFGAW 429

Query: 160 RGALIALNQEDGAQKWTISTEVPN-LTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQL 218
              L A+++  G   W       N +       P A  G V+   P   + A  A  G+ 
Sbjct: 430 DRHLYAVDRASGKLAWKWDNGSANRMYSPAMCVPVAHEGVVYIVAPDRYITALDAASGEE 489

Query: 219 IWQQPVGQPKGATEIDRLVDVDASPLVIGGTLFTVGFNGQLIAIDL--RSGQPIWKRN-- 274
           +W+        AT  + +        V G T+     N +++A +    +    W+ +  
Sbjct: 490 LWRS-----NEATVRESIGISSDGKWVYGKTM-----NDEVVAFETGRDAANLAWRMDCG 539

Query: 275 --YSSATDMATD-GSRLYLVTDKDHLVAVDTRSGTELWSNTQLEHRLLTAPKMIDDY-LV 330
             Y     M  + G  +Y  T    + ++D ++ T  W++ ++++ +     +ID++ LV
Sbjct: 540 FGYEHVPSMLIENGGAVYFGTKNSTVYSIDPQTRTIHWAH-KIDNSMANTVNVIDEHSLV 598

Query: 331 VGDAEGYLHWID 342
           V   +G +  ++
Sbjct: 599 VATMDGKVELLE 610



 Score = 51.6 bits (122), Expect = 6e-11
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)

Query: 190 SRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGT 249
           S P    G V +G   G++ A   E G+L W    G    ++ + R  D     LVI GT
Sbjct: 294 STPLVAKGKVIFGNSVGKVEALSIETGRLEWSYDTGAGIFSSPV-RYHD-----LVIFGT 347

Query: 250 LFTVGFNGQLIAIDLRSGQPIWKRNYSSA---TDMATDGSRLYLVTDKDHLVAVDTRSGT 306
                 +G + A++L  G+  WK   S+A   + +  DG ++Y+        A+D + G 
Sbjct: 348 -----GDGNIYALNLTDGELEWKTPASAAVLGSPIVEDG-KVYIGASDGKFRALDAKDGK 401

Query: 307 ELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGE 347
            LW    LE  +++ P +    ++ G  + +L+ +DR SG+
Sbjct: 402 VLWVFGGLEGPVVSKPLIYQGKVIFGAWDRHLYAVDRASGK 442