Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., Quinoprotein ethanol dehydrogenase precursor from Alteromonas macleodii MIT1002

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 20/165 (12%)

Query: 123 VNALDAETGEPLWASAIEGEVL----AAPAADNNIVIVNTSRGALIALNQEDGAQKWTIS 178
           +N    E   P+WA ++ GE      + P   + ++ V  S   + A++   G + W   
Sbjct: 61  INRDTVEEVRPVWAFSLGGEKQRGQESQPLVKDGVMYVTGSYSRVWAIDARTGEELWQYE 120

Query: 179 TEVPNLTLRGD---SRPTAVAGG-VFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEID 234
             +P+  +      +R  A+    V +GT   +L A   + G+ +W++ V   +    I 
Sbjct: 121 ARLPDGIMPCCDVINRGVALYDNLVIFGTLDAKLVALDKDTGKTVWKKKVEDYRAGYAIT 180

Query: 235 RLVDVDASPLVIGGTLFT------VGFNGQLIAIDLRSGQPIWKR 273
                 A+P+V+ G + T       G  G++ A D +SG+ +W R
Sbjct: 181 ------AAPIVVDGKVITGISGGEFGIVGKVYAYDAKSGKQLWVR 219



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 15/127 (11%)

Query: 112 GKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAAD---------NNIVIVNTSRGA 162
           G +++      V A+DA TGE LW           P  D         +N+VI  T    
Sbjct: 94  GVMYVTGSYSRVWAIDARTGEELWQYEARLPDGIMPCCDVINRGVALYDNLVIFGTLDAK 153

Query: 163 LIALNQEDGAQKWTISTEVPNLTLRGDSRPTAVAGGVFWGTPS------GRLAAAIAERG 216
           L+AL+++ G   W    E         + P  V G V  G         G++ A  A+ G
Sbjct: 154 LVALDKDTGKTVWKKKVEDYRAGYAITAAPIVVDGKVITGISGGEFGIVGKVYAYDAKSG 213

Query: 217 QLIWQQP 223
           + +W +P
Sbjct: 214 KQLWVRP 220



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 77  GVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFIGSENGVVNALDAETGEPLWA 136
           GV+KA+DP+ GK +W  +     S    G +T   G ++ G+  G + A D +TGE ++ 
Sbjct: 472 GVLKAIDPKTGKTVWRYN---NFSPLWGGVLTTGGGLVWTGNPEGYLMAFDDKTGEMVYK 528

Query: 137 SAIEGEVLAAP 147
                 ++ +P
Sbjct: 529 FQTGSGIVGSP 539



 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 20/175 (11%)

Query: 43  KTLWSASVGDGVGHYFSKLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGSAR 102
           + +W+ S+G G      +  P      ++V      V A+D + G+ +W  +  +     
Sbjct: 70  RPVWAFSLG-GEKQRGQESQPLVKDGVMYVTGSYSRVWAIDARTGEELWQYEARLPDGIM 128

Query: 103 -----LSGGITAAFGKLFIGSENGVVNALDAETGEPLWASAIEG-----EVLAAPAADNN 152
                ++ G+      +  G+ +  + ALD +TG+ +W   +E       + AAP   + 
Sbjct: 129 PCCDVINRGVALYDNLVIFGTLDAKLVALDKDTGKTVWKKKVEDYRAGYAITAAPIVVDG 188

Query: 153 IVIVNTSR------GALIALNQEDGAQKW---TISTEVPNLTLRGDSRPTAVAGG 198
            VI   S       G + A + + G Q W   T+   +  L   G      ++GG
Sbjct: 189 KVITGISGGEFGIVGKVYAYDAKSGKQLWVRPTVEGHMGYLWKDGKKTENGISGG 243



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 21/129 (16%)

Query: 268 QPIW-------KRNYSSATDMATDGSRLYLVTDKDHLVAVDTRSGTELWS-NTQLEHRLL 319
           +P+W       K+    +  +  DG  +Y+      + A+D R+G ELW    +L   ++
Sbjct: 70  RPVWAFSLGGEKQRGQESQPLVKDGV-MYVTGSYSRVWAIDARTGEELWQYEARLPDGIM 128

Query: 320 TAPKMI-------DDYLVVGDAEGYLHWIDRNSGEFIAQQLVND--SGFAV--GPLALND 368
               +I       D+ ++ G  +  L  +D+++G+ + ++ V D  +G+A+   P+ + D
Sbjct: 129 PCCDVINRGVALYDNLVIFGTLDAKLVALDKDTGKTVWKKKVEDYRAGYAITAAPIVV-D 187

Query: 369 GYVIVTRNG 377
           G VI   +G
Sbjct: 188 GKVITGISG 196



 Score = 32.7 bits (73), Expect = 3e-05
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 16/92 (17%)

Query: 219 IWQQPVGQPKGATEIDRLVDVDASPLVIGGTLFTVG--FNGQLIAIDLRSGQPIWKRNYS 276
           IW +P    KGA  +             G T+ +V   F G L AID ++G+ +W+ N  
Sbjct: 443 IWNEPTSYKKGAAYLGA-----------GFTIKSVNEDFIGVLKAIDPKTGKTVWRYNNF 491

Query: 277 S---ATDMATDGSRLYLVTDKDHLVAVDTRSG 305
           S      + T G  ++    + +L+A D ++G
Sbjct: 492 SPLWGGVLTTGGGLVWTGNPEGYLMAFDDKTG 523