Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., Outer membrane protein assembly factor BamB precursor from Alteromonas macleodii MIT1002

 Score =  338 bits (868), Expect = 1e-97
 Identities = 167/400 (41%), Positives = 250/400 (62%), Gaps = 25/400 (6%)

Query: 10  VAAGVLALLAGCAS------EEENVIMAPLPIVKSEFTPKTLWSASVGDGVGHYFSKLAP 63
           +A  V   ++GC++      ++E + +  L  ++++FTPK +W   +GDGV HYFS+L P
Sbjct: 18  MALAVSITMSGCSTISDWFADDEELEIRRLKPIEAKFTPKLVWDRDIGDGVNHYFSRLRP 77

Query: 64  DYAYDKVFVASRDGVVKALDPQNGKVIW---------------TTDLEIEGSARLSGGIT 108
            YAYDK++ A R G V A+DP++GKV+W                T+L   G     GGI 
Sbjct: 78  VYAYDKLYAADRHGAVVAMDPESGKVLWEKDFAQFRSEGMLSSVTNLWRSGETARIGGIA 137

Query: 109 AAFGKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQ 168
            A   +FIG+ENG V A+DAETGE +W +++ GE+LAAPAAD  I++VNT  G+L+  N 
Sbjct: 138 VADRHVFIGTENGYVAAMDAETGELVWDASVPGEILAAPAADEGILVVNTGAGSLLGFNT 197

Query: 169 EDGAQKWTISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPK 228
             G Q W    + P LTLRG S P A  GG   GTP+G++   + E G L W+  +  P 
Sbjct: 198 RTGEQLWRHEGDTPPLTLRGISGPIASNGGAIIGTPTGKIQVNLIETGVLAWETVIATPS 257

Query: 229 GATEIDRLVDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRL 288
           GATE++R+VD+D +P++ GGT++TV +NG L A++LRSG+ IWKR Y+S  ++  DG+++
Sbjct: 258 GATELERIVDIDTTPVLFGGTVYTVSYNGTLAAVELRSGRVIWKREYASFRNLNIDGNKI 317

Query: 289 YLVTDKDHLVAVDTRSGTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEF 348
           ++V +  ++ A+D R+G ELWS   L+HR LTA   + D++VVGD  G+LHWI++ +GE 
Sbjct: 318 FVVDNNSNVYALDRRNGVELWSQGSLKHRSLTAATPVGDHVVVGDNWGFLHWIEQETGEV 377

Query: 349 IAQQLV----NDSGFAVGPLALNDGYVIVTRNGQIKKLTI 384
           +A+  V     D      PL ++D  + VTRNG I  + +
Sbjct: 378 VARLDVGGDDEDDSIYAAPLKVDDKIIAVTRNGVIASVQV 417