Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., Quinoprotein ethanol dehydrogenase precursor from Alteromonas macleodii MIT1002

 Score = 44.7 bits (104), Expect = 7e-09
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 77  GVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFI-GSENGVVNALDAETGEPLW 135
           GV++A+DP +G++ WT   ++     +  G+ A  G L I G+ +G V A D ETGE LW
Sbjct: 491 GVLRAVDPISGEIKWTHKEKLP----MWAGVLATKGGLIITGTGDGYVKAFDEETGEELW 546

Query: 136 ASAIEGEVLAAP 147
                  +++ P
Sbjct: 547 KFQTGSGIISCP 558



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 13/81 (16%)

Query: 68  DKVFVASRDGVVKALDPQNGKVIWTTDLE-IEGSARLSGGITAA----FGKLFI-----G 117
           D VF  + D  V ALD   GKV W    E       ++G  T       GK+ +     G
Sbjct: 145 DLVFFGTLDAGVVALDRLTGKVKWKKRFEDYRAGYTMTGAPTIVKDQKSGKVMLIHGSSG 204

Query: 118 SENGVVNAL---DAETGEPLW 135
            E GVV  L   D ETGE +W
Sbjct: 205 DEFGVVGKLFARDPETGEEIW 225



 Score = 28.1 bits (61), Expect = 7e-04
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 10/67 (14%)

Query: 70  VFVASRDGVVKALDPQNGKVIWTTDLEIEGSARLSGGIT-AAFGKLFIGSENGVVNALDA 128
           +   + DG VKA D + G+ +W       GS  +S  IT    G+ +IG  +G   A+  
Sbjct: 525 IITGTGDGYVKAFDEETGEELWKFQ---TGSGIISCPITWEEDGEQYIGLASGYGGAV-- 579

Query: 129 ETGEPLW 135
               PLW
Sbjct: 580 ----PLW 582



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 12/136 (8%)

Query: 151 NNIVIVNTSRGALIALNQEDGAQKWTISTEVPNLTLRGD----SRPTAVAGG-VFWGTPS 205
           + IV V  S   + A   + G + W  +  +P   +R      +R  A+ G  VF+GT  
Sbjct: 95  DGIVYVTGSYSRIYAYEAKTGKKLWDYAHRLPE-GIRPCCDVVNRGAAIYGDLVFFGTLD 153

Query: 206 GRLAAAIAERGQLIWQQPVGQPK------GATEIDRLVDVDASPLVIGGTLFTVGFNGQL 259
             + A     G++ W++     +      GA  I +        L+ G +    G  G+L
Sbjct: 154 AGVVALDRLTGKVKWKKRFEDYRAGYTMTGAPTIVKDQKSGKVMLIHGSSGDEFGVVGKL 213

Query: 260 IAIDLRSGQPIWKRNY 275
            A D  +G+ IW R +
Sbjct: 214 FARDPETGEEIWMRPF 229



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 257 GQLIAIDLRSGQPIWKRNYSS---ATDMATDGSRLYLVTDKDHLVAVDTRSGTELW 309
           G L A+D  SG+  W         A  +AT G  +   T   ++ A D  +G ELW
Sbjct: 491 GVLRAVDPISGEIKWTHKEKLPMWAGVLATKGGLIITGTGDGYVKAFDEETGEELW 546



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 47/230 (20%), Positives = 83/230 (36%), Gaps = 58/230 (25%)

Query: 70  VFVASRDGVVKALDPQNGKVIWTTDLEIEGSARLSGGI----------TAAFGKL-FIGS 118
           V+V      + A + + GK +W      + + RL  GI           A +G L F G+
Sbjct: 98  VYVTGSYSRIYAYEAKTGKKLW------DYAHRLPEGIRPCCDVVNRGAAIYGDLVFFGT 151

Query: 119 ENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKWTIS 178
            +  V ALD  TG+  W    E             ++ +   G ++ ++   G +   + 
Sbjct: 152 LDAGVVALDRLTGKVKWKKRFEDYRAGYTMTGAPTIVKDQKSGKVMLIHGSSGDEFGVV- 210

Query: 179 TEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVD 238
                                      G+L A   E G+ IW +P  +      + RL  
Sbjct: 211 ---------------------------GKLFARDPETGEEIWMRPFVE----GHMGRLNG 239

Query: 239 VDASPLVIGG----TLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATD 284
            D++P   GG    T +    NG+++      G   W+   S++ D+ T+
Sbjct: 240 KDSTP--TGGSYEVTTWPKDENGEMVEAWHHGGGAPWQ---SASFDVETN 284