Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., Outer membrane protein assembly factor BamB from Acinetobacter radioresistens SK82

 Score =  129 bits (325), Expect = 1e-34
 Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 17/386 (4%)

Query: 1   MKKLFNQVLVAAGVLALLAGCASEEENVIMA---PLPIVKSEFTPKTLWSASVG--DGVG 55
           M + +      A + A L GC+S +  V  A   PLP +    +   ++S +V   D   
Sbjct: 1   MDRKYKISFAMAVLSAALIGCSSNKIKVEEAKPNPLPKLAQAKSLVPVFSQNVSSTDEAD 60

Query: 56  HYFSKLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLF 115
               +LA D     +F     G V A   +  + +W T +  +G   LS G  AA G + 
Sbjct: 61  PLRLRLAVDNGV--IFTVDPKGEVAAF--RGKQRLWQTRVSKQG---LSAGAEAADGVVI 113

Query: 116 IGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKW 175
           +G+  G + AL+  TG+ LW + + G +L+        VI   + G + A +   G + W
Sbjct: 114 VGNRKGQLFALEQATGKQLWTAQLSGALLSPSLIQAGRVITVANDGNVFAHDLASGQEVW 173

Query: 176 TISTEVPNLTLRGDSRP-TAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEID 234
                    +LRG + P +A    V   + +  + A     G    Q+ V    G +++ 
Sbjct: 174 AYRLPNAQFSLRGQAAPVSADPRTVLIASSNAYIYALDVLTGVPRMQRRVAVSSGRSDVQ 233

Query: 235 RLVDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVTDK 294
           RL+D+D  P++ G  L T  + GQ+   DL S Q +W  + SS        + +++  + 
Sbjct: 234 RLIDIDGDPVMAGQFLVTTSYQGQVTVTDLASQQVVWSEDASSTQRPEVFNNTVFVAQND 293

Query: 295 DHLVAVDTRSGTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQLV 354
             + A +  +G +LW N  L +R L+ P ++   LVVGD +G LH ID  SG+ + +   
Sbjct: 294 GKVTAFNLTTGEQLWQNDSLLNRRLSNPVILGQDLVVGDLDGVLHLIDPASGQLVGR--- 350

Query: 355 NDSGFAVGPLALNDGYVIV-TRNGQI 379
           + +G  V  L + DG + V TR G +
Sbjct: 351 SKTGGEVRSLQVIDGQLYVSTRKGAL 376