Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., Histidyl-tRNA synthetase (EC 6.1.1.21) from Variovorax sp. SCN45

 Score =  401 bits (1030), Expect = e-116
 Identities = 211/424 (49%), Positives = 282/424 (66%), Gaps = 14/424 (3%)

Query: 1   MAKTIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVT 60
           MA  + A++GMND LP +S  W+ +E  V++++  + Y  VR PI+E T LF R IGEVT
Sbjct: 1   MADKLNAVKGMNDILPPESARWEWLEATVRDLMGRFAYRNVRTPILERTALFVRGIGEVT 60

Query: 61  DVVEKEMYTFEDRNG-----DSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHE 115
           D+VEKEMY+FEDR       + LT+RPE TAG VR+ IE+ +LY   +RLWY GPMFR E
Sbjct: 61  DIVEKEMYSFEDRADKHGKFEHLTMRPENTAGLVRAVIEHNMLYEGPKRLWYTGPMFRRE 120

Query: 116 RPQKGRYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARA 175
             Q+GR+RQFHQ G E  G  GPDVDAELI++   LW+ +G+   VRLELNS+G    RA
Sbjct: 121 NVQRGRFRQFHQIGAEALGFAGPDVDAELILLANALWKAIGLTD-VRLELNSLGQPAERA 179

Query: 176 NYRTALIDYLEQYQNVLDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAESKQ 235
            +RT LI + E++ + LDED KRR+++NPLR+LD+KNP ++ ++  AP+L D+L AES  
Sbjct: 180 LHRTELIAHFEKHADKLDEDGKRRLHSNPLRILDTKNPAMKDVVESAPKLIDFLGAESLA 239

Query: 236 HFAGLCELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQL 295
           HF GL  +L A  I +T+N RLVRGLDYYN +VFE++T+ LGSQGTVC GGRYD L+ Q+
Sbjct: 240 HFEGLQAILKANDIAFTINPRLVRGLDYYNLSVFEFVTDRLGSQGTVCAGGRYDDLIAQI 299

Query: 296 GGKPTPAVGFAMGLERLVLMMETLGNTDVRRSVDVYMVTAGEGTMMAGMKLAEQLREQVP 355
           GGKP PAVG+AMG+ER++ +++  G        D Y +     +M   ++  +QLRE   
Sbjct: 300 GGKPAPAVGWAMGVERVLDLLKEQGAEVPAPVPDAYAIVPDAASMPVALRTLQQLRES-- 357

Query: 356 GLRVMTHF----GGGNFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDL--AGGEQNTV 409
           G+RV  H     G   FK Q K+AD  GA  AL+ G DE+A   V +K L    G Q + 
Sbjct: 358 GVRVQMHAATVDGLSGFKAQMKKADASGATYALIFGADELARGEVTLKALRDGSGAQTSR 417

Query: 410 AQAE 413
           A AE
Sbjct: 418 ALAE 421