Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  188 bits (477), Expect = 3e-52
 Identities = 127/359 (35%), Positives = 198/359 (55%), Gaps = 42/359 (11%)

Query: 7   SPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVP 66
           +P +RRPS  + +G V +G GAP+ VQSMTNT T D A+T  QI  L + G+++VR++V 
Sbjct: 13  APAQRRPSVAVQIGKVTVGGGAPVVVQSMTNTDTEDPASTAKQIAELARAGSELVRITVN 72

Query: 67  TMEAAEAFKLIKQQ-----VSVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIG--- 115
           T  AA A   I ++     V VP+V D H++    L+      + L   RINPGN+G   
Sbjct: 73  TPTAAAAVPRIAERLAMMGVEVPIVGDFHYNGHQLLEREPACAEVLAKYRINPGNVGFGK 132

Query: 116 -NEARIRSVVDCARDKGIPIRIGVNGGSLEK-------DLQLKYGEP------TPEALVE 161
            +E++  +++D A   G P+RIG N GSL++       D   +  EP        EAL+ 
Sbjct: 133 KHESQFGAIIDKALRYGKPVRIGANWGSLDQGMLTALMDENARRAEPWDASHVAREALIR 192

Query: 162 SAMRHVDILDRLNFDQFKV--SVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGS 219
           SA+    + +++   + ++  S K S V   +  YR LA + D  LHLG+TEAG    G 
Sbjct: 193 SALDSAVLAEKIGLPRERIILSCKVSGVQELIAVYRDLAARCDYALHLGLTEAGMGSKGI 252

Query: 220 VKSAVGLGMLLAEGIGDTLRISLAADP----VEEIKVGFDILKSLRIRSRGINFIACPSC 275
             S+  L +LL EGIGDT+RISL  +P      E+ V  ++L+++ +RS      ACP C
Sbjct: 253 TASSAALAVLLQEGIGDTIRISLTPEPGASRTGEVIVAQELLQTMGLRSFTPLVTACPGC 312

Query: 276 SR------QEFDVIGTVNALEQ----RLE-DVLTPMDVSIIGCVVNGPGEAEVSHLGLA 323
            R      QE       +  EQ    R++ D +  + ++++GC+VNGPGE++ +++G++
Sbjct: 313 GRTTSEFFQELAKTVQEHVREQMPVWRVKYDGVENLTLAVMGCIVNGPGESKHANIGIS 371