Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) from Xanthobacter sp. DMC5

 Score =  185 bits (469), Expect = 2e-51
 Identities = 125/377 (33%), Positives = 197/377 (52%), Gaps = 52/377 (13%)

Query: 8   PIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPT 67
           P +R  +  + VG V +G GAP+ VQSMTNT T D+A TV Q+ +L + G++IVR++V  
Sbjct: 23  PARRHATVGVPVGRVMVGGGAPVVVQSMTNTDTADIAGTVRQVAALARAGSEIVRITVDR 82

Query: 68  MEAAEAF-----KLIKQQVSVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIG---- 115
            EAA A      KL+ Q + VPLV D H+     L       + L   RINPGN+G    
Sbjct: 83  DEAAAAVPHIYEKLLAQGIDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFGDK 142

Query: 116 NEARIRSVVDCARDKGIPIRIGVNGGSLEKDLQLKYGEP-------------TPEALVES 162
            + +  ++V+ A     P+RIG N GSL+ +L  +  +              T EALV S
Sbjct: 143 KDRQFAAIVETAIRHDKPVRIGANWGSLDGELLTRLMDENARLPRPAEARAVTREALVRS 202

Query: 163 AMRHVDILDRLNFDQFKV--SVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSV 220
           A+    + + +   + ++  S K S V   +  Y  LA++ D  LHLG+TEAG    G V
Sbjct: 203 ALLSAALAEEIGLGRNRIILSAKVSAVQDLIAVYSELARRSDYALHLGLTEAGMGSKGIV 262

Query: 221 KSAVGLGMLLAEGIGDTLRISLAADP----VEEIKVGFDILKSLRIRSRGINFIACPSCS 276
            S   +G++L +GIGDT+R+SL  +P      E++V  +IL+++ +R+      ACP C 
Sbjct: 263 ASTAAMGVVLQQGIGDTIRVSLTPEPNGDRTREVQVAQEILQTMGLRTFVPLVAACPGCG 322

Query: 277 RQEFDVIGTVNALEQRLEDVL--------------TPMDVSIIGCVVNGPGEAEVSHLGL 322
           R    V      L Q ++D++                ++V+++GC+VNGPGE++ + +G+
Sbjct: 323 RTTSTVF---QELAQSVQDMIRTRMPVWKAQYPGVETLNVAVMGCIVNGPGESKHADIGI 379

Query: 323 A----GSNKKSAFYEDG 335
           +    G    +  + DG
Sbjct: 380 SLPGTGETPSAPVFIDG 396