Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  166 bits (419), Expect = 2e-45
 Identities = 101/275 (36%), Positives = 158/275 (57%), Gaps = 34/275 (12%)

Query: 10  KRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTME 69
           KRR +  + +G VP+G   PI VQSMT   T D   +V Q   + + G + +R++ P+++
Sbjct: 13  KRRKTRVVNIGGVPVGGDNPIRVQSMTTVDTMDTMGSVEQCIRMIEAGCEYIRITAPSIK 72

Query: 70  AAEAFKLIKQQV-----SVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSV- 123
            AE  + IK+++     SVPL+ADIHF    A +VA   V+ +R+NPGN  ++ + + + 
Sbjct: 73  EAENLQNIKEELHKQGYSVPLIADIHFTPNAA-EVAARIVEKVRVNPGNYADKKKFQVIE 131

Query: 124 ---------VDCARDKGIPI-----------RIGVNGGSLEKDLQLKYGEPTPEALVESA 163
                    +D  R++ +P+           RIG N GSL   +  +YG+ TP  +VESA
Sbjct: 132 YDDVSYQAELDRIRERFVPLVRICQEHGTAMRIGTNHGSLSDRILSRYGD-TPLGMVESA 190

Query: 164 MRHVDILDRLNFDQFKVSVKASDVFLAVDSYRLLAKKIDQ------PLHLGITEAGGARA 217
           +  + I +   +    +S+KAS+  + V +YRLL +K+++      PLHLG+TEAG A  
Sbjct: 191 LEFIRICEAEGYYDIVISMKASNTQVMVQAYRLLVQKLEEEGLQPYPLHLGVTEAGEAED 250

Query: 218 GSVKSAVGLGMLLAEGIGDTLRISLAADPVEEIKV 252
           G +KSAVG+G LL +G+GDT+R+SL   P  E  V
Sbjct: 251 GRIKSAVGIGTLLEDGLGDTVRVSLTEAPEAEAPV 285



 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 222 SAVGLGMLLAEGIGDTLRISLAADPVEEI-----------KVGFDILKSLRIRSRGINFI 270
           +A  +G LL +G+GD + +     P +E             + F IL++ R R     +I
Sbjct: 499 AATDVGGLLIDGLGDGVMLGTELLPRQEKPEELQTIDRLNSLSFGILQAARTRMSKTEYI 558

Query: 271 ACPSCSRQEFDVIGTVNALEQRLEDVLTPMDVSIIGCVVNGPGEAEVSHLGLAGSNK-KS 329
           +CPSC R  FD+  T   + +R  D L  + + I+GC+VNGPGE   +  G  G  K K 
Sbjct: 559 SCPSCGRTLFDLQETTAMIRKR-TDHLKGVKIGIMGCIVNGPGEMADADYGYVGVGKDKI 617

Query: 330 AFYEDGVRQKERFDNDDLVAQLEAKIR 356
           A Y      K+    D  V +L   IR
Sbjct: 618 ALYRGQTVIKKSVPADRAVDELIELIR 644