Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Serratia liquefaciens MT49

 Score =  634 bits (1636), Expect = 0.0
 Identities = 318/373 (85%), Positives = 351/373 (94%)

Query: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62
           M ++SPI RR STRIYVG+VPIGDGAPIAVQSMTNTRTTDV ATV QIK+LE+VG DIVR
Sbjct: 1   MHNQSPIIRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGVDIVR 60

Query: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122
           VSVPTM+AAEAFKLIKQQV+VPLVADIHFDYRIAL+VAEYGVDCLRINPGNIGNE+RIRS
Sbjct: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALQVAEYGVDCLRINPGNIGNESRIRS 120

Query: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182
           VVDCARDK IPIRIGVNGGSLEKD+Q KYGEPTPEAL+ESAMRHVDILDRLNFDQFKVSV
Sbjct: 121 VVDCARDKNIPIRIGVNGGSLEKDIQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSV 180

Query: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242
           KASDVFLAV SYRLLA +IDQPLHLGITEAGGAR+GSVKSA+GLG+LL+EGIGDTLRISL
Sbjct: 181 KASDVFLAVQSYRLLAARIDQPLHLGITEAGGARSGSVKSAIGLGLLLSEGIGDTLRISL 240

Query: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302
           AADPVEE+KVGFDILKSLRIR+RGINFIACP+CSRQEFDVIGTVNALEQRLED++TPMD+
Sbjct: 241 AADPVEEVKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDI 300

Query: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362
           SIIGCVVNGPGEA VS LG+ G +KKS FYEDGVRQK+RFDN+ ++ QLEAKIRAKA+ +
Sbjct: 301 SIIGCVVNGPGEALVSTLGVTGGHKKSGFYEDGVRQKDRFDNEQMIDQLEAKIRAKASMM 360

Query: 363 DEKNRIDIKHVEQ 375
           DE NRI +  +E+
Sbjct: 361 DESNRISVNLLEK 373