Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

 Score =  628 bits (1620), Expect = 0.0
 Identities = 318/373 (85%), Positives = 351/373 (94%), Gaps = 1/373 (0%)

Query: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62
           M +++PI+RR STRIYVG+VPIGDGAPIAVQSMTNTRTTDV ATV QIK+LE+VGADIVR
Sbjct: 1   MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60

Query: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122
           VSVPTM+AAEAFKLIKQQV+VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNE RIR 
Sbjct: 61  VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM 120

Query: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182
           VVDCARDK IPIRIGVN GSLEKDLQ KYGEPTP+AL+ESAMRHVD LDRLNFDQFKVSV
Sbjct: 121 VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV 180

Query: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242
           KASDVFLAV+SYRLLAK+IDQPLHLGITEAGGAR+G+VKSA+GLG+LL+EGIGDTLR+SL
Sbjct: 181 KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL 240

Query: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302
           AADPVEEIKVGFDILKSLRIRSRGINFIACP+CSRQEFDVIGTVNALEQRLED++TPMDV
Sbjct: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV 300

Query: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362
           SIIGCVVNGPGEA VS LG+ G NKKS  YEDGVR K+R DN+D++ QLEA+IRAKA++L
Sbjct: 301 SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVR-KDRLDNNDMIDQLEARIRAKASQL 359

Query: 363 DEKNRIDIKHVEQ 375
           DE  RID++ VE+
Sbjct: 360 DEARRIDVQQVEK 372