Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3) from Enterobacter asburiae PDN3

 Score =  622 bits (1604), Expect = 0.0
 Identities = 316/373 (84%), Positives = 346/373 (92%), Gaps = 1/373 (0%)

Query: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62
           M +++PI+RR S RIYVG+VPIGDGAPIAVQSMTNTRTTDV ATV QIK+LE+VGADIVR
Sbjct: 1   MHNQAPIQRRKSKRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR 60

Query: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122
           VSVPTM+AAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNE RIR 
Sbjct: 61  VSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM 120

Query: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182
           VVDCARDK IPIRIGVN GSLEKDLQ KYGEPTP+AL+ESAMRHVD LDRLNFDQFKVSV
Sbjct: 121 VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV 180

Query: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242
           KASDVFLAV+SYRLLAK+IDQPLHLGITEAGG R+GSVKSA+GLG+LL+EGIGDTLR+SL
Sbjct: 181 KASDVFLAVESYRLLAKQIDQPLHLGITEAGGLRSGSVKSAIGLGLLLSEGIGDTLRVSL 240

Query: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302
           AADPVEEIKVGFDILKSLRIR+RGINFIACP+CSRQEFDVIGTVNALEQRLED++TPMDV
Sbjct: 241 AADPVEEIKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV 300

Query: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362
           SIIGCVVNGPGEA VS LG+ G NKKS  YEDGVR K+R DN D++ QLEA+IRAKAA +
Sbjct: 301 SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVR-KDRLDNSDMIDQLEARIRAKAAMM 359

Query: 363 DEKNRIDIKHVEQ 375
           DE  RI ++ VE+
Sbjct: 360 DETQRISVQQVEK 372