Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 661 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  166 bits (420), Expect = 2e-45
 Identities = 101/285 (35%), Positives = 157/285 (55%), Gaps = 34/285 (11%)

Query: 11  RRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTMEA 70
           RR +  + +GDV IG   PI VQSMT   T D   ++ +   + K G +++R++ P+++ 
Sbjct: 21  RRKTIPVQIGDVVIGGDNPIVVQSMTTKDTMDTEGSIEECIRMIKSGCELIRITAPSIKE 80

Query: 71  AEAFKLIKQQVS-----VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSV-- 123
           AE  + IK  ++     VPLVADIHF    A ++A   V+ +RINPGN  ++ +   +  
Sbjct: 81  AENLRHIKAGLAERGYHVPLVADIHFTPNAA-EIAARIVEKVRINPGNYADKKKFEEIEY 139

Query: 124 -------------------VDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAM 164
                              V   ++ G  +RIG N GSL   +  +YG+ TP  +VESA+
Sbjct: 140 TDESYQAELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD-TPLGMVESAL 198

Query: 165 RHVDILDRLNFDQFKVSVKASDVFLAVDSYRLLAKKIDQ------PLHLGITEAGGARAG 218
             + I +  ++    +S+K+S+  + V +YRLL +K+D+      PLHLG+TEAG    G
Sbjct: 199 EFLRICEEEHYHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFQPYPLHLGVTEAGDGEDG 258

Query: 219 SVKSAVGLGMLLAEGIGDTLRISLAADPVEEIKVGFDILKSLRIR 263
            VKSAVG+G LL +G+GDT+R+SL  DP  E  V   ++    +R
Sbjct: 259 RVKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYALR 303



 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 56/164 (34%), Positives = 81/164 (49%), Gaps = 17/164 (10%)

Query: 209 ITEAG----GARAGSVKSAVGLGMLLAEGIGDTLRISLA--ADP-----VEEIK----VG 253
           +TEAG     A    + +A  LG LL +G+GD + + L   A P     +E IK    V 
Sbjct: 487 VTEAGYKEQDADQTMLYAATDLGGLLIDGLGDGVMLGLEEKAAPDRDALMETIKLHNSVS 546

Query: 254 FDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDVSIIGCVVNGPG 313
           F +L++ R R     +I+CPSC R  FD+  T   + +R  D L  + + I+GC+VNGPG
Sbjct: 547 FGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKRT-DHLKGVKIGIMGCIVNGPG 605

Query: 314 EAEVSHLGLAGSNK-KSAFYEDGVRQKERFDNDDLVAQLEAKIR 356
           E   +  G  GS K K   Y+     K    ++  V +L   IR
Sbjct: 606 EMADADYGYVGSGKGKITLYKGKEVVKRAVPSEQAVDELINIIR 649