Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) from Azospirillum sp. SherDot2

 Score =  400 bits (1027), Expect = e-116
 Identities = 210/364 (57%), Positives = 266/364 (73%), Gaps = 2/364 (0%)

Query: 1   MSMQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADI 60
           M+++    I RR S +I VG+V +G  API+VQ+MTNT TTDV ATV QI++ E+VGADI
Sbjct: 1   MTVRAYRQILRRKSRQIRVGNVLVGGDAPISVQTMTNTPTTDVKATVEQIQAAERVGADI 60

Query: 61  VRVSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARI 120
           VRVS P  E+A A K I +QV VP+VADIHF Y+ A++ AE G  CLRINPGNIG+  R+
Sbjct: 61  VRVSCPDRESALALKDIVRQVKVPIVADIHFHYKRAIEAAESGAACLRINPGNIGSAERV 120

Query: 121 RSVVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKV 180
           R VV  A+D G  +RIGVN GSLE+DL  KYGEP PEA+VESA+ H  IL+  +F +FK+
Sbjct: 121 REVVKAAKDHGCSMRIGVNAGSLEQDLLEKYGEPCPEAMVESALNHAKILEDNDFREFKI 180

Query: 181 SVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRI 240
           SVKASD FLAV +Y+ LA+  D PLH+GITEAGG RAG+VKS++GLGMLL  GIGDTLR+
Sbjct: 181 SVKASDAFLAVAAYQGLAEACDYPLHIGITEAGGLRAGTVKSSIGLGMLLWSGIGDTLRV 240

Query: 241 SLAADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPM 300
           SL+ADP EE+ VG+DILKSL +R RG+  I+CPSC+RQ F+VI TV  LEQ+L  + TP+
Sbjct: 241 SLSADPAEEVLVGYDILKSLGLRRRGVTVISCPSCARQNFNVIKTVELLEQKLAHITTPL 300

Query: 301 DVSIIGCVVNGPGEAEVSHLGL-AGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKA 359
            +S+IGCVVNGPGEA  + +GL  G N     Y  GV    R  + D+V  L   +  KA
Sbjct: 301 TLSVIGCVVNGPGEARETDIGLTGGGNNTHQVYLSGVTD-HRLKDQDIVQHLVGLVEKKA 359

Query: 360 ARLD 363
           A ++
Sbjct: 360 AEIE 363