Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., FIG021952: putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  192 bits (488), Expect = 1e-53
 Identities = 126/368 (34%), Positives = 190/368 (51%), Gaps = 51/368 (13%)

Query: 1   MNTEQ-QDYNQTETTEQVNQPAIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSI 59
           MNTE   D N+ +TT             G  L+  RE LGL+Q+ +A+RL L++S ++ I
Sbjct: 1   MNTEATHDQNEAQTT-------------GVRLRNAREQLGLSQQAVAERLCLKVSTVRDI 47

Query: 60  EENRFEDGQVATFTRGYLRSYAKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQ 119
           EE++      +TF RGY+RSYA+ V + E E+L   +     +      M+SFS   +R+
Sbjct: 48  EEDKAPSDLASTFLRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK 107

Query: 120 LHDSRIMLITWVILAVIVGMSTLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDASL--- 176
             D  +M  TW++L V+VG++  WWWQN +      + TT+A  + +++ +  D+     
Sbjct: 108 KRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQ--EEITTMADQSTAELNADKDSGQSVP 165

Query: 177 ----ANEDFATVPPLNELQDAAPASEEAPMSQESLSGEASELTPPAPNEADVVTDKPVVE 232
               A     T P       A P    A     + +  A++ T  AP++A+V        
Sbjct: 166 LDTGAATSQDTTPAQTAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANV-------- 217

Query: 233 ETAAAPVAPAQPQGQTPVQSQAPVAAAPVTQPEAAPSAPSQPVSSSTESASALLVMNFSA 292
           +TAA   APA     T   S  P + A V  P A P+A               LVMNF+A
Sbjct: 218 DTAATSAAPA----ATETPSALPTSQAGVAAPAADPNA---------------LVMNFTA 258

Query: 293 DCWIQVKDATGKTLSTGVKKAGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGY-TS 351
           DCW++V DATGK L +G+++   +++L+GQ PYKL +GAP  V I    +PVDLS +  +
Sbjct: 259 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 318

Query: 352 GKVARLTL 359
            +VARLTL
Sbjct: 319 NQVARLTL 326