Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  412 bits (1059), Expect = e-120
 Identities = 207/359 (57%), Positives = 264/359 (73%), Gaps = 3/359 (0%)

Query: 2   TTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61
           +T K NLL   +  +  FF + +GEK FRA QVMKWI+HFG DDFD M N++K LR+KLK
Sbjct: 4   STVKTNLLGLTQPEMEKFF-DSIGEKRFRAGQVMKWIHHFGVDDFDAMTNVSKALRDKLK 62

Query: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGDQD-VETVYIPEDDRATLCVSSQVGCALECKF 120
           A  E+R P V     S+DGT KW +RV     VETVYIP+  R TLCVSSQ GCAL+C F
Sbjct: 63  AIAEVRGPEVVSEDISSDGTRKWVVRVASGSCVETVYIPQGKRGTLCVSSQAGCALDCSF 122

Query: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA 180
           CST +QGFN NL  +E+IGQVW A +  G    T  R ITNVVMMGMGEPLLN  N+I A
Sbjct: 123 CSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAITNVVMMGMGEPLLNFDNVISA 182

Query: 181 LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR 240
           + +M+DDLG+G+SKRRVT+STSGVV  ++++   IDV+LA+SLHAPND LR++++PIN +
Sbjct: 183 MHLMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDALRNQLVPINKK 242

Query: 241 WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF 300
           + ++  LE  +RY+A+    R  +T+EY LL  +ND  EHA E+ ELLK TPCKINLIPF
Sbjct: 243 YPLKMLLESCQRYMATLGEKR-VLTIEYTLLKDINDKVEHAVEMIELLKDTPCKINLIPF 301

Query: 301 NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           NP+P S Y++PSN+ I RFQ  L Q  + VT+R TRG+DIDAACGQLVG V+DRT+R++
Sbjct: 302 NPFPHSGYERPSNNAIRRFQDQLHQAGYNVTVRTTRGEDIDAACGQLVGQVMDRTRRSE 360