Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., 23S rRNA m(2)A-2503 methyltransferase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  414 bits (1063), Expect = e-120
 Identities = 208/359 (57%), Positives = 265/359 (73%), Gaps = 3/359 (0%)

Query: 2   TTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61
           +T K NLL   ++ +  FF + +GEK FRA QVMKWI+HFG DDFD M N++K LREKLK
Sbjct: 4   STGKTNLLGLTQQEMEKFF-DSIGEKRFRAGQVMKWIHHFGVDDFDAMTNVSKALREKLK 62

Query: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGDQD-VETVYIPEDDRATLCVSSQVGCALECKF 120
           A  E+R P V     S+DGT KW +RV     VETVYIP+  R TLCVSSQ GCAL+C F
Sbjct: 63  ACAEVRGPEVVSEDISSDGTRKWVVRVESGSCVETVYIPQGKRGTLCVSSQAGCALDCSF 122

Query: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA 180
           CST +QGFN NL  +E+IGQVW A +  G    T  R ITNVVMMGMGEPLLN  N+I A
Sbjct: 123 CSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAITNVVMMGMGEPLLNFDNVIAA 182

Query: 181 LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR 240
           + +M+DDLG+G+SKRRVT+STSGVV  ++++   IDV+LA+SLHAPND LR++++PIN +
Sbjct: 183 MHLMMDDLGYGISKRRVTLSTSGVVPMIDELSKHIDVSLALSLHAPNDALRNQLVPINKK 242

Query: 241 WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF 300
           + ++  LE  RRY++S    R  +T+EY +L  +ND  EHA E+ ELLK TPCKINLIPF
Sbjct: 243 YPLKMLLESCRRYMSSLGEKR-VLTIEYTMLKDINDKVEHAVEMIELLKDTPCKINLIPF 301

Query: 301 NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           NP+P S Y++PSN+ I RFQ  L Q  + VT+R TRG+DIDAACGQLVG V+DRT+R++
Sbjct: 302 NPFPHSGYERPSNNAIRRFQDLLHQAGYNVTVRTTRGEDIDAACGQLVGQVMDRTRRSE 360