Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Dual-specificity RNA methyltransferase RlmN from Pseudomonas putida KT2440

 Score =  401 bits (1030), Expect = e-116
 Identities = 207/359 (57%), Positives = 257/359 (71%), Gaps = 3/359 (0%)

Query: 2   TTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61
           +T KINLL   +  +  FF + +GEK FRA QVMKWI+HFG  DF  M N+ K LREKL+
Sbjct: 4   STGKINLLGLTQPEMEQFF-DSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLE 62

Query: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGDQD-VETVYIPEDDRATLCVSSQVGCALECKF 120
           A  EIR P V     SADGT KW +RV     VETVYIP DDR TLCVSSQ GCAL+C F
Sbjct: 63  AVAEIRPPEVVSEDISADGTRKWVIRVASGSCVETVYIPTDDRGTLCVSSQAGCALDCSF 122

Query: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA 180
           CST +QGFN NL  +E+IGQVW A +  G       R ITNVVMMGMGEPLLN  N+I A
Sbjct: 123 CSTGKQGFNSNLTAAEVIGQVWLANKSFGTVPAKVDRAITNVVMMGMGEPLLNFDNVIAA 182

Query: 181 LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR 240
           ++IM+DDLG+G+SKRRVT+STSGVV  ++++   IDV+LA+SLHAPND+LR++++PIN +
Sbjct: 183 MKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVPINKK 242

Query: 241 WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF 300
           + ++  LE    Y+++    R  +TVEY LL  VND  EHA ++ ELL+  PCKINLIPF
Sbjct: 243 YPLKVLLESCMGYMSTLGGKR-VLTVEYTLLKDVNDQPEHAAQMIELLRDVPCKINLIPF 301

Query: 301 NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           NP+P S Y++PSN+ I RFQ  L      VT R TRGDDIDAACGQLVG V DRT+R++
Sbjct: 302 NPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDRTRRSE 360