Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  138 bits (347), Expect = 3e-37
 Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 24/299 (8%)

Query: 65  EIRAPYVSEAQHSA-DGTIKWAMRVGD-QDVETVYIPEDDRATLCVSSQVGCALECKFCS 122
           E+    V  ++H   DG+ +  + + D Q VE+V +P D    LCVS+QVGCA+ C FC 
Sbjct: 58  ELAGLAVLRSEHPGEDGSARLLVALADGQTVESVLLPRDG---LCVSTQVGCAVGCVFCM 114

Query: 123 TAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPALE 182
           T Q G  R +  +EI+ QV  A           RR +  VV MGMGEP  N+ N++ A++
Sbjct: 115 TGQGGLVRQVGSAEIVAQVALART---------RRVVKKVVFMGMGEPAHNLDNVLEAID 165

Query: 183 IMLDDLGFGLSKRRVTVSTSG---VVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPIND 239
           + L  +G  +  + +  ST G   V   L Q  G++  ALA+SLH     LR +++P   
Sbjct: 166 L-LGTVG-NIGHKNLVFSTVGDPRVFEALPQ--GRVKPALALSLHTTKADLREQLLPRAP 221

Query: 240 RWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIP 299
           R   EA +    RY   + A    +  ++ LL+ +NDG +    L  LL G    +N+IP
Sbjct: 222 RLTPEALVAAGERY---ARATGYPIQYQWTLLEGINDGDDEIEGLVRLLHGKYAILNMIP 278

Query: 300 FNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRT 358
           +N     PY++PS  +     + L +      +R++ G D++  CGQL        +RT
Sbjct: 279 YNTVDDLPYRRPSWEQAAGIARRLHRRGILTKLRQSAGQDVEGGCGQLRARAEKPARRT 337