Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Magnetospirillum magneticum AMB-1

 Score =  272 bits (696), Expect = 1e-77
 Identities = 151/352 (42%), Positives = 211/352 (59%), Gaps = 8/352 (2%)

Query: 1   MTTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKL 60
           M   K NL+   R  L    A  +GEK FRA+Q+  W+Y+ G  DF +M +I+K +   L
Sbjct: 33  MDDSKTNLIGLSRDQLIAEMAS-IGEKPFRAKQLWHWMYNRGETDFAKMTSISKSMHGAL 91

Query: 61  KAKCEIRAPYVSEAQHSADGTIKWAMRVGD-QDVETVYIPEDD--RATLCVSSQVGCALE 117
             +  +R P V++   SAD T KW ++  D  + ETVYIP+ D  R  +C+S+QVGC L 
Sbjct: 92  AERYVVRRPGVTKELISADTTRKWLLKFDDGHEAETVYIPDADEERGAVCISTQVGCTLT 151

Query: 118 CKFCSTAQQGFNRNLRVSEIIGQVWRAAREIGL--EKETGRRPITNVVMMGMGEPLLNMK 175
           C+FC T  Q   RNL  +EI+GQ   A    G     + G R ++N+V+MGMGEPL N +
Sbjct: 152 CRFCHTGTQLLVRNLSAAEIVGQFMVARDSYGEWPTPDDGGRQLSNIVVMGMGEPLYNFE 211

Query: 176 NLIPALEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIM 235
           N+  ALEI +D  G G+SKRR+T+STSGVV  +++   ++ V LA+SLHA  D++R  IM
Sbjct: 212 NVATALEIAMDGEGIGISKRRITLSTSGVVPMMKECGERLGVNLAVSLHAVTDEIRDRIM 271

Query: 236 PINDRWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKI 295
           PIN ++ ++  ++  R Y  +SNA R  +T EY++L  +ND    A  L +L+KG P K 
Sbjct: 272 PINKKYPLKELMQACREYPGASNARR--ITFEYIMLKGINDSAADARALLKLVKGLPAKF 329

Query: 296 NLIPFNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQL 347
           NLIPFNP+PGS +  P       F   L    ++  IR  RG DI AACGQL
Sbjct: 330 NLIPFNPWPGSEFDTPDIKTTKAFSDILQDAGYSAPIRMPRGRDILAACGQL 381