Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

 Score =  409 bits (1052), Expect = e-118
 Identities = 245/595 (41%), Positives = 364/595 (61%), Gaps = 29/595 (4%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADATRVGYPAREQAETDPHNTV 82
           GIDLGTTNS VA +       + +++G    PSV+ Y    T VG PA+ QA T+P NT+
Sbjct: 6   GIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNTL 65

Query: 83  ISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPI-QISADILKALAE 139
            ++KRL+GR  +D  + +    +PY+   ++ G   V+ A+G K    Q+SA++LK + +
Sbjct: 66  FAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVE-AKGQKMAAPQVSAEVLKKMKK 124

Query: 140 RATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDS-G 198
            A   LG  +   VITVPAYF+DAQR ATKDA  +AGL V R++NEPTAAA+AYGLD  G
Sbjct: 125 TAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQG 184

Query: 199 QEGVIAVYDLGGGTFDISILRLSR----GVFEVLATGGDSALGGDDFDHLIADHLQAQ-- 252
            +  IAVYDLGGGTFDISI+ +        FEVL+T GD+ LGG+DFD+ + ++L  +  
Sbjct: 185 GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEFK 244

Query: 253 ----IGLTSLTAEQQRALINAATQAKIDLTEYMTAELNV----------LGWQGSLTREE 298
               I L +     QR L  AA +AKI+L+     ++N+                +TR +
Sbjct: 245 KDQGIDLRNDPLAMQR-LKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 303

Query: 299 LENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTS 358
           LE L+  L++++L   + AL DA +  +++ +V++VGG TR P V+++V EFFG+ P   
Sbjct: 304 LEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKD 363

Query: 359 INPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVAR 418
           +NPDE VA+GAA+Q  +LAG   D  +LLLDV PLSLGIETMGG++ K+I +NTTIP   
Sbjct: 364 VNPDEAVAVGAAVQGGVLAGEVKD--VLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTKA 421

Query: 419 AQEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADG 478
            Q F+T +D Q+A+++HV+QGER+     +SL +F+L+GI P   G   I V + +DADG
Sbjct: 422 NQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDADG 481

Query: 479 LLSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEADRV 538
           +L V+A +K TG + +I ++ S GLSD E+ +M++++ A  + D     LA  R +AD++
Sbjct: 482 ILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQADQM 541

Query: 539 IEGLVSALQADGDELLNEQERQTLLQAIERLIELRNGDNADAIEQGIKDTDKASQ 593
           I      +   G E L   E+  +  AI  L   + G++   I+  ++    A+Q
Sbjct: 542 IHATRKQITEAG-EALPADEKAKIETAINELETAKKGEDKAEIDAKVQALMAAAQ 595