Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., molecular chaperone DnaK (NCBI) from Escherichia coli BW25113

 Score =  426 bits (1095), Expect = e-123
 Identities = 249/612 (40%), Positives = 372/612 (60%), Gaps = 28/612 (4%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADA-TRVGYPAREQAETDPHNT 81
           GIDLGTTNS VA +   T   L +++G    PS++ Y  D  T VG PA+ QA T+P NT
Sbjct: 6   GIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNT 65

Query: 82  VISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAE 139
           + ++KRL+GR  QD  + +    +P++  A++ G   V+       P QISA++LK + +
Sbjct: 66  LFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKK 125

Query: 140 RATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ 199
            A   LG  +   VITVPAYF+DAQR ATKDA  +AGL V R++NEPTAAA+AYGLD G 
Sbjct: 126 TAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGT 185

Query: 200 EG-VIAVYDLGGGTFDISILRLSR----GVFEVLATGGDSALGGDDFDHLIADHLQAQ-- 252
               IAVYDLGGGTFDISI+ +        FEVLAT GD+ LGG+DFD  + ++L  +  
Sbjct: 186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 245

Query: 253 ----IGLTSLTAEQQRALINAATQAKIDLTEYMTAELNV----------LGWQGSLTREE 298
               I L +     QR L  AA +AKI+L+     ++N+                +TR +
Sbjct: 246 KDQGIDLRNDPLAMQR-LKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304

Query: 299 LENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTS 358
           LE+L+  L+ +++   + AL+DAG+   ++ +V++VGG TR P V+++V EFFG+ P   
Sbjct: 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKD 364

Query: 359 INPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVAR 418
           +NPDE VAIGAA+Q  +L G+  D  +LLLDV PLSLGIETMGG++  +I +NTTIP   
Sbjct: 365 VNPDEAVAIGAAVQGGVLTGDVKD--VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKH 422

Query: 419 AQEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADG 478
           +Q F+T +D Q+A+++HV+QGER+   D +SL +F+L GI P   G   I VT+ +DADG
Sbjct: 423 SQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADG 482

Query: 479 LLSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEADRV 538
           +L V+A +K++G + +I +K S GL++DE+ +M++D+ A A+ D     L + R + D +
Sbjct: 483 ILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHL 542

Query: 539 IEGLVSALQADGDELLNEQERQTLLQAIERLIELRNGDNADAIEQGIKDTDKASQDFASR 598
           +      ++  GD+ L   ++  +  A+  L     G++  AIE  +++  + SQ     
Sbjct: 543 LHSTRKQVEEAGDK-LPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEI 601

Query: 599 RMDKSIRSALAG 610
              +  +   AG
Sbjct: 602 AQQQHAQQQTAG 613