Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor from Escherichia coli BL21

 Score =  266 bits (680), Expect = 2e-75
 Identities = 189/572 (33%), Positives = 295/572 (51%), Gaps = 60/572 (10%)

Query: 19  KLAAGIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGA-DATRVGYPAREQAETD 77
           +LA GIDLGTTNSL+A  + G A  + +  G  + PS+++    +   VG PA  +  + 
Sbjct: 5   ELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSH 64

Query: 78  PHNTVISVKRLLGRSLQDINQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKAL 137
           P  T    KR +G +            +R  +     P            ++S+ +L++L
Sbjct: 65  PDKTAALFKRAMGSNTN----------WRLGSDTFNAP------------ELSSLVLRSL 102

Query: 138 AERATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDS 197
            E A   L   +  VVI+VPAYF D QR  T+ AA LAGL+ +RL+NEPTAAA+AYGL +
Sbjct: 103 KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHT 162

Query: 198 GQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLIADHL--QAQIGL 255
            Q     V+DLGGGTFD+++L  +  V EV A+ GD+ LGG+DF H++ D +  +A +  
Sbjct: 163 QQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRADVAR 222

Query: 256 TSLTAEQQRALINAATQAKIDLTEYMTAELNVLGWQ-------GSLTREELENLIAPLLK 308
           T+L   +  AL      AK      M      + WQ             ELE+L  PLL 
Sbjct: 223 TTLNESELAALYACVEAAKCSNQSPMH-----IRWQYQDEARECDFYENELEDLWLPLLN 277

Query: 309 KTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTSINPDEVVAIG 368
           +  +   +AL+DA ++  ++  +V+VGG+++ P V+      FG+ P  S +P  +VA+G
Sbjct: 278 RLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIVALG 337

Query: 369 AAIQADILAGNKPDAEMLLLDVIPLSLGIET----MGGLVEKIIPRNTTIPVARAQEFTT 424
           AAIQA     ++   E++L D+ P SLG+E     + G+   II RNTT+PV+R + ++T
Sbjct: 338 AAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRVETYST 397

Query: 425 FKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGA-AHIRVTYQVDADGLLSVT 483
               Q +++V+V QGE   V +   +  F    +P    GA   I + +  D +GLL V 
Sbjct: 398 MHPEQDSITVNVYQGENHKVKNNILVESFD---VPLKKTGAYQSIDIRFSYDINGLLEVD 454

Query: 484 ALEKSTGVQAEIQVKPSYGLSDDEVTQ--------------MLKDSMAYAK-EDMLARAL 528
            L +   V++ +       LS  ++ +              ML +    AK E++ ARAL
Sbjct: 455 VLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEELWARAL 514

Query: 529 AEQRVEADRVIEGLVSALQADGDELLNEQERQ 560
            ++R E  RVI    +ALQ++    ++E  R+
Sbjct: 515 GDEREEIGRVITDFDAALQSNDMARVDEVRRR 546