Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., DNAK Protein from Agrobacterium fabrum C58

 Score =  436 bits (1120), Expect = e-126
 Identities = 251/566 (44%), Positives = 363/566 (64%), Gaps = 23/566 (4%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADATR-VGYPAREQAETDPHNT 81
           GIDLGTTNS VA +       + +++G    PS+V +  D  R VG PA+ QA T+P NT
Sbjct: 6   GIDLGTTNSCVAVMDGKDTKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNT 65

Query: 82  VISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAE 139
           + +VKRL+GR  +D  + +    +P+     + G   V+    + +P QISA IL+ + E
Sbjct: 66  LFAVKRLIGRRYEDPTVEKDKALVPFEIVKGDNGDAWVKAQDKNYSPSQISAMILQKMKE 125

Query: 140 RATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ 199
            A + LG ++   VITVPAYF+DAQR ATKDA  +AGL VLR++NEPTAAA+AYGLD  +
Sbjct: 126 TAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYGLDKKE 185

Query: 200 EGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLIADHLQAQ------I 253
              IAVYDLGGGTFDIS+L +  GVFEV +T GD+ LGG+DFD  + ++L  +      I
Sbjct: 186 GKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAGEFKKDQGI 245

Query: 254 GLTSLTAEQQRALINAATQAKIDLTEYMTAELNVLGWQG----------SLTREELENLI 303
            L +     QR L  AA +AKI+L+     E+N+                LTR + E+L+
Sbjct: 246 DLKNDKLALQR-LKEAAEKAKIELSSSQQTEINLPFITADASGPKHLTLKLTRAKFESLV 304

Query: 304 APLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTSINPDE 363
             L+++T+  C+ ALKDAGV A E+ EVV+VGG +R P V+E V + FG+ P   +NPDE
Sbjct: 305 DDLVQRTVAPCKAALKDAGVTAAEIDEVVLVGGMSRMPKVQEVVKQLFGKEPHKGVNPDE 364

Query: 364 VVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVARAQEFT 423
           VVA+GAAIQA +L G+  D  +LLLDV PLSLGIET+GG+  ++I RNTTIP  ++Q F+
Sbjct: 365 VVAMGAAIQAGVLQGDVKD--VLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFS 422

Query: 424 TFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVT 483
           T +D Q+A+++ V QGEREM  D + L +F L G+PP   G   I VT+ +DA+G++ V+
Sbjct: 423 TAEDNQSAVTIRVSQGEREMAQDNKLLGQFDLVGLPPSPRGVPQIEVTFDIDANGIVQVS 482

Query: 484 ALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEADRVIEGLV 543
           A +K TG + +I+++ S GLSD ++ +M+KD+ A A+ D   RA  E + +A+ +I    
Sbjct: 483 AKDKGTGKEQQIRIQASGGLSDADIEKMVKDAEANAEADKKRRAGVEAKNQAESLIHSTE 542

Query: 544 SALQADGDELLNEQERQTLLQAIERL 569
            +++  GD+ ++E +R+ +  AI  L
Sbjct: 543 KSVKEYGDK-VSETDRKAIEDAIASL 567