Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ from Xanthobacter sp. DMC5

 Score =  107 bits (268), Expect = 2e-28
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 12/244 (4%)

Query: 8   VVLVGTTHSGNIGSAARAMKVMGLSQMVLVDP-QCQVDAQAIALAAGASEIALNAQIYPT 66
           ++LV      NIGSAARAM   GLS++ +V+P Q   + +A   AAGA  I   AQ++P 
Sbjct: 19  IILVEPQLGDNIGSAARAMGNFGLSRLRIVNPRQGWPNDRARTFAAGADRILDEAQLFPD 78

Query: 67  LEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISE-ANQHSVAMVFGRERTGLTNDE 125
           L AA+ D      T+AR R +   ++   E   +  S  A    VA+VFGRERTGL  +E
Sbjct: 79  LRAALHDVKFAFATTARERGMAKRVVGADEATAEARSRMAAGEEVALVFGRERTGLYTEE 138

Query: 126 LQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMA----YLALQQSSQSSTLQEEYPRHQ 181
           + LC   + +P NP ++SLNLA  V +  YE   A     L      +S    +      
Sbjct: 139 VSLCDAILTLPVNPAFASLNLATCVAVAGYEWSKAESGGALPFAPPDRSPLADK-----G 193

Query: 182 ELERFYAHLEQVIMQTEFI-SAQQPGQVMNKLRRMFTRARPEAQEINILRGILTSVQKSI 240
           +L  F+ HLE  +  + F  S ++    +  LR +F R     Q++  L G +T++++  
Sbjct: 194 DLFAFFDHLETALQTSGFFRSPEKAPSTIRNLRNIFHRLGLTRQDLATLHGAVTALEEGR 253

Query: 241 SRKE 244
             +E
Sbjct: 254 EGRE 257