Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200) from Variovorax sp. SCN45

 Score =  137 bits (346), Expect = 2e-37
 Identities = 80/231 (34%), Positives = 134/231 (58%), Gaps = 6/231 (2%)

Query: 5   RVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQV---DAQAIALAAGASEIALNA 61
           R + +L+ T+H+GN+G+AARAMK MG S +VLV P+        + I  A+GA ++  NA
Sbjct: 2   RTRFILIQTSHAGNVGAAARAMKTMGFSDLVLVAPRWANVLRREETIQRASGALDVLTNA 61

Query: 62  QIYPTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHSVAMVFGRERTGL 121
           +I  TL+ A+     +  T+   R    P   PRE  E L  + +QH VA +FG ER G+
Sbjct: 62  RIVETLDEALDGVTHLCATAMIPRDFGPPTRTPREHLEPLAKQGDQH-VAFLFGSERFGM 120

Query: 122 TNDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQ 181
            N+++  C+  + +P +P++ SLNL  A+Q+++YE R+A    +     + +Q      Q
Sbjct: 121 RNEDVYRCNVALTIPTDPKFGSLNLGAAIQVVAYEWRLALGGYEVRESVNPVQA--ADAQ 178

Query: 182 ELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGI 232
            +     H E+ ++   F+  + P ++M +L+++F RA+P  +EI+ILRGI
Sbjct: 179 AVAGMLDHWERSLVDIGFLDPEAPKKLMPRLQQLFNRAQPTPEEIHILRGI 229