Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., 'tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)' transl_table=11 from Sphingobium sp. HT1-2

 Score =  110 bits (274), Expect = 5e-29
 Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 9/238 (3%)

Query: 8   VVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQ-VDAQAIALAAGASEIALNAQIYPT 66
           +VLV      NIG AARAM   GL++M LV P+    +  A   AAGA  I   AQ+Y T
Sbjct: 131 IVLVRPQLGENIGKAARAMLNFGLTEMRLVSPRDGWPNPDAGPAAAGADFILDKAQVYET 190

Query: 67  LEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHSVAMVFGRERTGLTNDEL 126
           L  AVADC  V  T+ R R +  P++ P E  +++   A Q   A VFG ER+GL  +++
Sbjct: 191 LADAVADCAHVYATTVRKRGVTKPVVTPEEAAQEI--HAAQGRCAYVFGPERSGLETEDV 248

Query: 127 QLCHYHVCVPANPEYSSLNLAMAVQLLSYE-VRMAYLALQQSSQSSTLQEEYPRHQELER 185
            L    + VP NPE+ SLNLA AV L +YE  + A LA    ++   L E  P+ +ELE 
Sbjct: 249 ALARKILTVPINPEFGSLNLAQAVILCAYEWSKQANLAQPTVTE---LGEPAPQ-EELEG 304

Query: 186 FYAHLEQVIMQT-EFISAQQPGQVMNKLRRMFTRARPEAQEINILRGILTSVQKSISR 242
               L  ++ +   F    +       LR + T+      E+  LRG+L+ + +   R
Sbjct: 305 MILQLNTLLEKVGYFFPPDRAPATKLTLRNLLTKPGWNHLEVRTLRGVLSHLNRPRER 362