Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ from Pseudomonas sp. DMC3

 Score =  246 bits (627), Expect = 4e-70
 Identities = 127/246 (51%), Positives = 173/246 (70%), Gaps = 8/246 (3%)

Query: 2   MLERVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNA 61
           +L+ ++VVLV T+H GNIG AARAMK MGLS++VLV+P+     +A A A+GA +I  NA
Sbjct: 1   LLQNIRVVLVNTSHPGNIGGAARAMKNMGLSRLVLVEPRVFPHHEADARASGAGDILENA 60

Query: 62  QIYPTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHS-VAMVFGRERTG 120
            +  TLE A+  C LV+GTSAR R + WP+L+PRECG K++ EA Q + +A+VFGRE +G
Sbjct: 61  LVVATLEDALVGCNLVLGTSARDRRIPWPLLDPRECGNKVVEEAGQGAEIALVFGREDSG 120

Query: 121 LTNDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQ-------QSSQSSTL 173
           LTN+ELQ CH+HV +P++P +SSLNL  AVQ+LSYEVRMA+LA Q       +   +S  
Sbjct: 121 LTNEELQRCHFHVHIPSDPAFSSLNLGAAVQVLSYEVRMAWLAAQGQPSKVEKEEVASVK 180

Query: 174 QEEYPRHQELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGIL 233
             E     ELERFY HLEQ ++  EF+  ++P  +M +LRR++ R+     E+NILRGIL
Sbjct: 181 SAELATMDELERFYEHLEQTLVAIEFLDPEKPRHLMARLRRLYGRSSVSRAEMNILRGIL 240

Query: 234 TSVQKS 239
           T  QK+
Sbjct: 241 TETQKA 246