Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., tRNA:Cm32/Um32 methyltransferase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 5   RVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNAQIY 64
           RV +VLV    + NIG+AARAMK MG + + +VD Q  ++     +A G+ +I  N +++
Sbjct: 2   RVTIVLVAPARAENIGAAARAMKTMGFTDLRIVDSQAHLEPATRWVAHGSGDIIDNIEVF 61

Query: 65  PTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEAN-QHSVAMVFGRERTGLTN 123
            TL  A+ D    V T+ARSR          E    L  ++      A+VFGRE +GLTN
Sbjct: 62  HTLADALHDVDFTVATTARSRAKFHYYASHAELVPLLQEKSRWMRHAALVFGREDSGLTN 121

Query: 124 DELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQEL 183
           DEL L      VP   +Y SLNL  AV +  Y++      +QQ+++S  + +E     +L
Sbjct: 122 DELALADVLTGVPMAADYPSLNLGQAVMVYCYQLAG---LMQQTTESVDIADE----SQL 174

Query: 184 ERFYAHLEQVIMQTE 198
           +   A L +++   E
Sbjct: 175 QALRARLLRLLTTLE 189