Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., tRNA/rRNA methyltransferase from Escherichia coli ECRC62

 Score =  105 bits (262), Expect = 8e-28
 Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 13/239 (5%)

Query: 5   RVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNAQIY 64
           R+ ++LV    + NIG+AARAMK MG S++ +VD Q  ++     +A G+ +I  N +++
Sbjct: 2   RITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPATRWVAHGSGDIIDNIKVF 61

Query: 65  PTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHS-VAMVFGRERTGLTN 123
           PTL  ++ D    V T+ARSR        P E    L  +++  S  A+VFGRE +GLTN
Sbjct: 62  PTLVESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTN 121

Query: 124 DELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQEL 183
           +EL L      VP   +Y SLNL  AV +  Y++      +QQ ++S T  +++      
Sbjct: 122 EELALADVLTGVPMVADYPSLNLGQAVMVYCYQLA---TLIQQPTKSDTTADQHQLQALR 178

Query: 184 ERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGILTSVQKSISR 242
           ER  A L  + +  +        Q +  L         E ++  +L  +L  ++K+I++
Sbjct: 179 ERVMALLTTLAVADDIKLVDWLQQRLGLL---------EQRDTAMLHRLLHDIEKNITK 228