Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., tRNA (guanosine(18)-2'-O)-methyltransferase from Escherichia fergusonii Becca

 Score =  102 bits (253), Expect = 9e-27
 Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 4/182 (2%)

Query: 5   RVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNAQIY 64
           R+ ++LV    + NIG+AARAMK MG S++ +VD Q  ++  A  +A G+ +I  N +++
Sbjct: 2   RITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPVARWVAHGSGDIIDNIKVF 61

Query: 65  PTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHS-VAMVFGRERTGLTN 123
            TL  ++ D    V T+ARSR        P E    L  +++  S  A+VFGRE +GLTN
Sbjct: 62  KTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTN 121

Query: 124 DELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQEL 183
           +EL L      VP   +Y SLNL  AV +  Y++      +QQ ++S T  +++      
Sbjct: 122 EELALADVLTGVPMVADYPSLNLGQAVMVYCYQLA---TLIQQPAKSDTTADQHQLQALR 178

Query: 184 ER 185
           ER
Sbjct: 179 ER 180